Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0418 ATGGATAAAAGCTGCCAATCCTCTGCGGACTCCTCTACTACCACAGGAGCCACGCCCAGTAATAGCAATGGCACCGTCACTTCTACTAATCTCAGGCACCTCAACAAGCTCTCTCACAAGATCTCCAAGCCCTCTCTTCGAAAACCCTCCTTTGATTCTTCTCTCCCTGAGTCCCAGACCCACAAGCCCGATCACAGTCGGCCACAACCGGCGGCTCAGGAGCAAGCGCAGCAGCGGAATTTGCAGCATCAGCCTCCTGTCTACAACATCAACAAGAACGACTTCAGGGATGTAGTCCAGAAGCTCACTGGTTCGCCCGCTCACGAGCGCATCTCCACTCCGCCTCCTATTCAACAGCCCAATCCCCCCAGCTCTCGCCTTCAGCGTATACGCCCTCCTCCCCTCGCGCAGATTAGCAATCGCCCGCCTCCCTTGCTAGGCGGCGCTGTACCCCGTCCTCTACCGCCTCCGCTTAACGCCGCTTCGGCGTCGACTAGCAACCCCATTAACGCTGCTTCTGTCGCTAATTTCTCTGACTTTGTGAGACCGCTTCCGCCGTTATCTCCTCTGCCACCTTTTCCGTCCGTCCACGCAGAATCTCCGGTATCCGCGTATATGCGCTATCTCCAGAATTCCACGTCCAACATGGATTGGAATCCCAAGCAGTTCTCTGGTTTCCCGCCATTAGCTCCTTTAGTCTCGCCTCGCTGGAACAATATGGCTCCACAACAGCTTCAGCCAGAGCCTCAAGGCCCTCCATCGCATCCTTCGCAGACACCAGCAAATGCGCCGGCGCAACCGCAGTTTCAGATACCGTCTTCGCCAGCCCCTTTCGGATGCTTGAATTCGCCGAGGTCGCCACACCCTCTGCTTTCCCCAAGTCTTCTGTTTTCGCCTTCCTCGGGATTTGGTTTGCTGGTTTTGTACATGGTTTTAGGTGGAGGGAATCAGGTTCATTCAATTTGTAGGGGTTGGTGTAATTTGAGGCATCCATCTTTATTGCCAAACATGGAAGAATCTCCAGTTGTCGTTCATCTGCGTTTTTCAATCATGGCAATATTCAAATTGGTTGGTGAAGGTGAAACCACACTCTGGGAGCGCTAA 1104 0.538 MDKSCQSSADSSTTTGATPSNSNGTVTSTNLRHLNKLSHKISKPSLRKPSFDSSLPESQTHKPDHSRPQPAAQEQAQQRNLQHQPPVYNINKNDFRDVVQKLTGSPAHERISTPPPIQQPNPPSSRLQRIRPPPLAQISNRPPPLLGGAVPRPLPPPLNAASASTSNPINAASVANFSDFVRPLPPLSPLPPFPSVHAESPVSAYMRYLQNSTSNMDWNPKQFSGFPPLAPLVSPRWNNMAPQQLQPEPQGPPSHPSQTPANAPAQPQFQIPSSPAPFGCLNSPRSPHPLLSPSLLFSPSSGFGLLVLYMVLGGGNQVHSICRGWCNLRHPSLLPNMEESPVVVHLRFSIMAIFKLVGEGETTLWER 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0418 367 MobiDBLite consensus disorder prediction 136 158 - -
Lele03g0418 367 MobiDBLite consensus disorder prediction 1 93 - -
Lele03g0418 367 MobiDBLite consensus disorder prediction 106 165 - -
Lele03g0418 367 MobiDBLite consensus disorder prediction 1 35 - -
Lele03g0418 367 MobiDBLite consensus disorder prediction 239 269 - -
Lele03g0418 367 PANTHER PROTEIN HAIKU1 22 302 IPR039612 -
Lele03g0418 367 MobiDBLite consensus disorder prediction 70 89 - -
Lele03g0418 367 Pfam VQ motif 83 108 IPR008889 -
Lele03g0418 367 MobiDBLite consensus disorder prediction 113 129 - -
Lele03g0418 367 MobiDBLite consensus disorder prediction 246 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0418 Lele-ChrLele03 2390217 2392480 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0418 03 2390217 2392480 Lele25g0376 25 2289409 2290153 CCT
Lele03g0418 03 2390217 2392480 Lele27g1707 27 22431456 22432519 CCT
Lele03g0418 03 2390217 2392480 Lele28g0386 28 2373710 2374784 CCT
Lele03g0418 03 2390217 2392480 Lele03g0418 03 2390217 2392480 ECH
Lele01g0406 01 2385240 2386842 Lele03g0418 03 2390217 2392480 hybridization
Lele02g0406 02 2363737 2365497 Lele03g0418 03 2390217 2392480 hybridization