Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0417 ATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTATGAAGAGATGGTCGAGTTCATGGAGAAAGTCTCCGCCGCCGTCGACAACGAAGAACTTACTGTCGAAGAGAGAAACCTCCTCTCTGTTGCCTACAAAAACGTCATCGGTGCCCGCCGTGCCTCCTGGCGTATCATTTCCTCCATCGAGCAAAAGGAGGAGAGCCGCGGTAACGAGGATCACGTCTCCATGATCCGTGATTACCGATCTAAGATCGAGACTGAGCTCTCCAACATCTGCGATGGGATCCTGAAGCTTCTTGATTCCCGTCTTATTCCCTCCGCTTCTTCCGGTGATTCCAAGGTCTTTTACCTCAAAATGAAGGGTGATTATCACAGGTACCTCGCTGAGTTTAAGACTGGATCCGAGCGCAAGGATGCTGCTGAGAGCACGCTCACTGCGTATAACTCTGCCCAGGACATTGCAAAGGCCGAACTGCCTCCCACTCATCCGATTAGGCTTGGCCTGGCGCTGAACTTTTCGGTGTTCTACTATGAGATATTTAACTCCCCAGATCGCGCTTGCAATCTTGCAAAACAGCAAGAGCTTCGTTATGGTATGAGTTCTTCTGTTCTTATGGTACATCGGTTACTTATGAGCCATTTTCACATGGATAATCACCAGGCTTTTGACGAAGCAATTGCTGAATTGGATACTTTGGGGGAGGAGTCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTGACCCTTTGGACCTCCGACATGCAGGATGATGGTGCAGATGAAATTAAAGAGGCGGCACCTAAGCAAGATGAAGAAGCCAAGTGA 831 0.4946 MAKLAEQAERYEEMVEFMEKVSAAVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIRDYRSKIETELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGSERKDAAESTLTAYNSAQDIAKAELPPTHPIRLGLALNFSVFYYEIFNSPDRACNLAKQQELRYGMSSSVLMVHRLLMSHFHMDNHQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKQDEEAK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0417 276 PIRSF 14-3-3 1 192 IPR000308 -
Lele03g0417 276 PIRSF 14-3-3 214 265 IPR000308 -
Lele03g0417 276 PRINTS 14-3-3 protein zeta signature 171 197 IPR000308 -
Lele03g0417 276 PRINTS 14-3-3 protein zeta signature 29 58 IPR000308 -
Lele03g0417 276 PRINTS 14-3-3 protein zeta signature 78 102 IPR000308 -
Lele03g0417 276 PRINTS 14-3-3 protein zeta signature 109 131 IPR000308 -
Lele03g0417 276 PRINTS 14-3-3 protein zeta signature 144 170 IPR000308 -
Lele03g0417 276 Coils Coil 1 21 - -
Lele03g0417 276 ProSitePatterns 14-3-3 proteins signature 1. 35 45 IPR023409 -
Lele03g0417 276 ProSitePatterns 14-3-3 proteins signature 2. 235 254 IPR023409 -
Lele03g0417 276 Pfam 14-3-3 protein 1 191 IPR023410 -
Lele03g0417 276 Pfam 14-3-3 protein 217 253 IPR023410 -
Lele03g0417 276 Gene3D - 1 266 IPR036815 -
Lele03g0417 276 SMART 1433_4 1 266 IPR023410 -
Lele03g0417 276 SUPERFAMILY 14-3-3 protein 1 255 IPR036815 -
Lele03g0417 276 PANTHER 14-3-3 PROTEIN 1 257 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0417 Lele-ChrLele03 2386616 2388460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0417 1 274 14-3-3 family AT1G78300 82.545 1.84e-161 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0417 03 2386616 2388460 Lele25g0374 25 2273714 2281875 CCT
Lele03g0417 03 2386616 2388460 Lele26g0389 26 2345768 2350798 CCT
Lele03g0417 03 2386616 2388460 Lele28g0384 28 2360061 2365021 CCT
Lele03g0417 03 2386616 2388460 Lele03g0417 03 2386616 2388460 ECH
Lele01g0405 01 2380816 2383120 Lele03g0417 03 2386616 2388460 hybridization
Lele02g0404 02 2358552 2360371 Lele03g0417 03 2386616 2388460 hybridization