Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0414 ATGGAGTATGCAGCCGAAGGGGAATTCTTTGATAGGATATGTAGGGCTGGTAGATTTATTGAGGACGAGGCAAGATTTTTCCCTCAGCAACTGATATCAGGAGTCAGTTATTGTCATTCAATGAAAATCTGTCATAGAGATCTTAAGCTTGAAAATACGCTCTTAAATGGCAGTACTGCACCACGCATCAAAATTTGCGACTTTGGATACTCAAAGTCATCTGTATTCCATTCACAACCTAAGTCTACTTTAGGCACTCCAGCCTACATTGAACCTGAGGTCCTAACAAAGAAAGAGTACGATGGAAAGATAGCAGATGTTTGGTCATGTGGAGTCACCTTATATGTGATGTTAGTTGGGGATTATCCCTTTGAAGACCCAGAGGCTCCAAGAAACTTTAGGAAAACCATAGGGTGGATACTCAGCGTCCAATACTCAATCCCAGATTATGTACGTGTTTCCATGGAATGTAAACATCTTCTACCACGAATATTTGTGGCCAATCCTGAAAAGAGAATAAGTATGATAGAGATTAAAAACCACCCGTGGTTTCTGACGAACTTGCCCGTTGAACTAATGGAAGGAGGGAGTGGGCAGAGTAATGATGAAAACAATCCATGGCAAAGTGTGGAGGAAGTGCTGTCCATAATACAAGAGGCGAGAAAACCTCCGAATGTCCCCATGGTTGGTGGCCTTCTTGCCGGAGGGAGCAGCATGGACCTTGATGACTTAGATGCTGATGCAGATCTTGAAGATATAGGGACAAGTGGCGAATTTGTGGGCTATATTTAA 792 0.428 MEYAAEGEFFDRICRAGRFIEDEARFFPQQLISGVSYCHSMKICHRDLKLENTLLNGSTAPRIKICDFGYSKSSVFHSQPKSTLGTPAYIEPEVLTKKEYDGKIADVWSCGVTLYVMLVGDYPFEDPEAPRNFRKTIGWILSVQYSIPDYVRVSMECKHLLPRIFVANPEKRISMIEIKNHPWFLTNLPVELMEGGSGQSNDENNPWQSVEEVLSIIQEARKPPNVPMVGGLLAGGSSMDLDDLDADADLEDIGTSGEFVGYI 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0414 263 PANTHER SERINE/THREONINE KINASE 1 199 - -
Lele03g0414 263 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Lele03g0414 263 SUPERFAMILY Protein kinase-like (PK-like) 1 192 IPR011009 -
Lele03g0414 263 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0414 263 FunFam Serine/threonine-protein kinase SRK2E 4 192 - -
Lele03g0414 263 Gene3D Transferase(Phosphotransferase) domain 1 1 223 - -
Lele03g0414 263 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0414 263 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0414 Lele-ChrLele03 2379217 2380813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0414 1 194 CBL-interacting serine-threonine protein kinases AT4G24400 44.444 1.50e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele03g0414 Pkinase 9e-46 CL0016