Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0383 ATGGCATTTAACATGGACTTGTACAGTGATCTGCAAATTCAGCCGGGTCCCTTCAACGGTGAGCTTATGGAAGCACTCGAGCCTTTTATGAAAAGTGCCTCCGCAACGTCCTCACCGTCTCCGTACTCGCTCTCATCCTCTGCTTCGAATCTATTCCTACCTTCTCAACTACCCTCTTGCAACTGCTTCCTTCCCTATCCTTGGGTCCCTCTACAGCCCGATTTGTTTGCAGATGTTTGCTCTCCATCGATGACCCATGTATTTACCGACGGGTTATTCAACAACCAAAACTTGGTTGGTTTCGGGCAGCCAACTCCTCTTCTTGGGTTCAACAACCAGAAGTCTCAGACTAACCAGATTCAACCTCATATCCTTCCCCAGAATCCCCAGAACATGACCGGGCAGCAAAATACCCTCAGCTTCTTGAGCCCCAAGCCTATTCCCATGAAGCAAATGGGGGCGCCTTCTAGGCCAACCAAGCTGTTCAGAGGGGTCAGGCAGCGGCATTGGGGAAAATGGGTCGCCGAGATCCGACTTCCGAAGAACCGGACCCGTCTCTGGCTTGGCACCTTCGATACTGCCGAAGAAGCTGCCCTCGCCTACGACAGGGCCGCTTACAAGCTCAGAGGTGACTCCGCCAGGCTTAACTTCCCCAACCTCCGACACCAAGGTTCCTGTGTGGAGGGCGAATTCGGGGAGTTCAAGCCTCTGCATTCCTCCGTAGATGCAAAGCTTCAAGCAATTTGCGAAGGTATGGCTGATATGCAGAAGCAGGGGAAGTCGGAGAGATCAAATAGGTCTTCAGCGCGGTCGAAATCGGGGTCCAAGGCCGCTCAGCCGCAGACGGTTACTCTCTCGGATGAGCAGCCGGTAGCCGGCGAAGCTGATTTGGAGGGAGCGGAGAACTCCGACAACAAGGTGGAGACTTCATTGTCTCCGGTGATGACTGAGAGTGGAGAGTCTGGTGGTTCATCTCCTCTGTTGGATTTGACATTCGACGATGCCAGTGAGCCTCAGTGGGAAAGTATGGCGGACATTTTTAATCTGCAGAAGTACCCTTCTGAGATCGACTGGGCATCATTATGA 1086 0.5285 MAFNMDLYSDLQIQPGPFNGELMEALEPFMKSASATSSPSPYSLSSSASNLFLPSQLPSCNCFLPYPWVPLQPDLFADVCSPSMTHVFTDGLFNNQNLVGFGQPTPLLGFNNQKSQTNQIQPHILPQNPQNMTGQQNTLSFLSPKPIPMKQMGAPSRPTKLFRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDRAAYKLRGDSARLNFPNLRHQGSCVEGEFGEFKPLHSSVDAKLQAICEGMADMQKQGKSERSNRSSARSKSGSKAAQPQTVTLSDEQPVAGEADLEGAENSDNKVETSLSPVMTESGESGGSSPLLDLTFDDASEPQWESMADIFNLQKYPSEIDWASL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0383 361 FunFam Ethylene-responsive transcription factor 2 160 219 - -
Lele03g0383 361 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 361 - -
Lele03g0383 361 SUPERFAMILY DNA-binding domain 161 219 IPR016177 GO:0003677
Lele03g0383 361 MobiDBLite consensus disorder prediction 270 288 - -
Lele03g0383 361 Pfam AP2 domain 162 210 IPR001471 GO:0003700|GO:0006355
Lele03g0383 361 MobiDBLite consensus disorder prediction 255 333 - -
Lele03g0383 361 MobiDBLite consensus disorder prediction 304 325 - -
Lele03g0383 361 SMART rav1_2 161 224 IPR001471 GO:0003700|GO:0006355
Lele03g0383 361 PRINTS Ethylene responsive element binding protein signature 162 173 IPR001471 GO:0003700|GO:0006355
Lele03g0383 361 PRINTS Ethylene responsive element binding protein signature 184 200 IPR001471 GO:0003700|GO:0006355
Lele03g0383 361 ProSiteProfiles AP2/ERF domain profile. 161 218 IPR001471 GO:0003700|GO:0006355
Lele03g0383 361 CDD AP2 160 220 IPR001471 GO:0003700|GO:0006355
Lele03g0383 361 Gene3D AP2/ERF domain 161 219 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0383 Lele-ChrLele03 2215061 2216146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0383 1 361 AP2-EREBP Transcription Factor Family AT1G78080 48.549 3.16e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele03g0383 AP2 9.6e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0347 26 2090172 2090805 Lele03g0383 03 2215061 2216146 CCT
Lele27g1755 27 22736017 22739754 Lele03g0383 03 2215061 2216146 CCT
Lele28g0346 28 2105859 2108724 Lele03g0383 03 2215061 2216146 CCT
Lele03g0383 03 2215061 2216146 Lele03g0383 03 2215061 2216146 ECH
Lele01g0376 01 2193214 2194296 Lele03g0383 03 2215061 2216146 hybridization
Lele02g0373 02 2165962 2168222 Lele03g0383 03 2215061 2216146 hybridization