Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0380 ATGAAGGTGGCAAAAGTAAAGAAGGGAGTGGGATGGAGAAAACGGAGGCGACCTCAGGATACTGGAAAAACAGTGAAGCTAATTGTTGAGGAGAGAATGCTCCCTGAAGGAAAGACCACAGAAAGCGGTGGGGTAGGCGATGGTTATATAGACAAACGGCCGAGTGACGGAGGAGGGAAGAAAGAATGGGATCAGAGAATGGGATGTGTGGGGAGAGGGGAAGGAAAAAAGAAGAATGGGATTGTGTGGGGAGAGGGGAAGGAAAAAAGAAGAATGGGATTGTGTGGGGAGAGGGGAAGGAAAAAAGAGAAATGGGGTGGAAAAAGGAGTGGATGGCAAATGGCAGGAAAGAAGGGGAATCCAGGTGATTGCTTACGGCCCAGTGACTCCAGACGGGTCGGCCTTACTTTTGGCCTTTGGGCTATCAGCCCATCTGTTATTTGTTGGGCCTTTTGGGACCTGGGAATAGAATTGGCTCTTGACAGAATGCAGCTGTCAGCCATTGTCCTTCCGTGCTTGCTCCTGCTCTGTGAAGCGGTGGCCCCTGCCGAGTTGACTCAGTCGCCGCCTTTTGCCTGTGACTGGTCCAATCCTGCTACCAGATCCTACCCATTCTGCAACCCCAAGCTCAGCGTGTCTCGAAGGGCCCAAGACCTGGTGTCCCGACTCTCATTGGACGAGAAGCTAGCTCAACTAGTGAACGACGCACCTCCCATTCCTCGACTCGGAATCCCGGAATACCAATGGTGGAATGAGGCTTTACACGGAGTCGCCAACGTCGGACGCGGAATCCGATTCAATGGCTCCATTACTTCTGCTACTAGCTTCCCTCAAGTCATCCTCTCCGCTGCCACCTTCGACTCCCACCTCTGGTACAGAATCGGTCAGGCCATTGGAGCGGAAGCGAGAGCAATCTATAATGCAGGGCAAGCCACGGGCATGACATTTTGGGCTCCAAACATTAACATCTTCAGGGATCCAAGATGGGGGAGAGGGCAAGAGACAGCCGGCGAAGACCCGCAGGTTACTTCCAAGTACGCTGTGTCGTATGTGAGGGGGGTACAGGGCGATTCCTTTCAGGGAGGCAAACTCAGTGGTCATCTTCAAGCTTCCGCTTGCTGCAAGCATTTCACCGCCTACGATTTGGACAACTGGAAGGGTGTCAGTCGCTTCGACTTCGATGCTCGCGTCACTTTGCAAGATTTAGCGGACACATATCAGCCTCCATTTCGGAGTTGCGTAGAGCAAGGACGAGCAAGTGGGATAATGTGCGCTTATAACCGAGTGAATGGGGTTCCAAACTGCGCAGATTACGATCTCCTAACTAAAACCGCCAGAAAACAGTGGGGTTTTCATGGGTATATCACTTCCGATTGTGGAGCAGTCTCACTCCTTCGTGCTCATCAAGGATATGCTAAATCGGCGGAAGATGCTGTGGCCGATGTCCTTCGGGCTGGAATGGACGTAGAGTGTGGTGATTACTTGACGAAGTATGCTAAATCAGCAGTGGTGCAGGAAAAATTACCAATATCTCAAGTAGATCGTGCACTTCACAACCTGTTCTCTATCAGAATAAGGCTGGGTCTATTCGATGGGAATCCAGCCAAGCTGCCCTTCGGTGCGATCGGCCCTAATCAAGTGTGTTCAAAAGATCACCAGTATTTGGCTCTTGAAGCTGCCAGAAATGGCATTGTCCTTTTGAAGAACTCTGCCAGACTTCTCCCACTCCCTAAAACAAAACCCACGATTTCCCTTGCACTCATAGGTCCTAACGCCAATGCGTCCCCTTTAACTCTCCTTGGAAACTATGCAGGCCCTCCCTGTCAACTCGTGACGCCATTGCAGGCCTTTCAGCACTACGTTAAGAACACCATTTATCACCCTGGTTGTGATGATGGAGCCAAGTGTTCTTTGGCTCAGATTGGCAAAGCCGTGGCAATCGCCTCGAAGGTGGATTACGTGGTGCTGATGATGGGATTGGATCAAAGTCAAGAGAGAGAAGATCGTGATCGGGTTCACCTGGACTTACCCGGCAAGCAGCTGGAACTCATACACAGCGTTGCTAAAGCTTCCAAGAGGCCAGTCGTTCTGGTGATCTTTTCTGGAGGCCCTGTTGATATTTCTTCGGCCAAGTATAACAACAAAGTTGGAGGCATCTTATGGGCCGGTTATCCCGGAGAAGCTGGAGGAATCGCACTTGCTCAGATTATCTTTGGCGATCACAACCCAGGAGGAAGATTACCAGTGACTTGGTACCCAAAAGATTTCATAAGAGTGCCGATGACAGACATGAGGATGCGAGCTGATCCATCTTCTCGGTATCCCGGAAGGACTTACCGGTTTTACACGGGCCCAAAGGTGTATGAGTTCGGCTATGGCTTAAGCTACTCTAAATATTCGCATGAGTTCGTCTCTGTCACGCAAAACAAGCTTCACTTGAATCAATCGTCGGCTTATTTGATAGTTGAGAATTCGGAGACCATTCGTATCAAATCAGTATCAGAGATGGGTGCAAAATTGTGCCAAAGCATGTCGGTGTCAGTGACGGTGGGAGTTAAAAATGATGGAAGTATGGCGGGGAAGCATTCGGTGTTGCTATTTGCAAGGCATGCAAAACAGAGAGGTGGAAATGCGATCAAACAGTTGGTGGGTTTTGAGAGTGTGATGTTAGAGGCAGGGGAAAGGGCAGAAGTTGGATTTGAGATAAGCCCGTGCGAGCACCTTAGCAGAGCAAGCGAGGGTGGCTCCAAAGTCATTGAAGAAGGGTCCCACCTGTTGATTGTTGGGGATGAAGAGTATCCAATTGATGTCATTTTCTGA 2820 0.5011 MKVAKVKKGVGWRKRRRPQDTGKTVKLIVEERMLPEGKTTESGGVGDGYIDKRPSDGGGKKEWDQRMGCVGRGEGKKKNGIVWGEGKEKRRMGLCGERGRKKEKWGGKRSGWQMAGKKGNPGDCLRPSDSRRVGLTFGLWAISPSVICWAFWDLGIELALDRMQLSAIVLPCLLLLCEAVAPAELTQSPPFACDWSNPATRSYPFCNPKLSVSRRAQDLVSRLSLDEKLAQLVNDAPPIPRLGIPEYQWWNEALHGVANVGRGIRFNGSITSATSFPQVILSAATFDSHLWYRIGQAIGAEARAIYNAGQATGMTFWAPNINIFRDPRWGRGQETAGEDPQVTSKYAVSYVRGVQGDSFQGGKLSGHLQASACCKHFTAYDLDNWKGVSRFDFDARVTLQDLADTYQPPFRSCVEQGRASGIMCAYNRVNGVPNCADYDLLTKTARKQWGFHGYITSDCGAVSLLRAHQGYAKSAEDAVADVLRAGMDVECGDYLTKYAKSAVVQEKLPISQVDRALHNLFSIRIRLGLFDGNPAKLPFGAIGPNQVCSKDHQYLALEAARNGIVLLKNSARLLPLPKTKPTISLALIGPNANASPLTLLGNYAGPPCQLVTPLQAFQHYVKNTIYHPGCDDGAKCSLAQIGKAVAIASKVDYVVLMMGLDQSQEREDRDRVHLDLPGKQLELIHSVAKASKRPVVLVIFSGGPVDISSAKYNNKVGGILWAGYPGEAGGIALAQIIFGDHNPGGRLPVTWYPKDFIRVPMTDMRMRADPSSRYPGRTYRFYTGPKVYEFGYGLSYSKYSHEFVSVTQNKLHLNQSSAYLIVENSETIRIKSVSEMGAKLCQSMSVSVTVGVKNDGSMAGKHSVLLFARHAKQRGGNAIKQLVGFESVMLEAGERAEVGFEISPCEHLSRASEGGSKVIEEGSHLLIVGDEEYPIDVIF 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0380 939 Gene3D - 549 797 IPR036881 GO:0004553|GO:0005975
Lele03g0380 939 Gene3D Immunoglobulins 824 937 IPR013783 -
Lele03g0380 939 MobiDBLite consensus disorder prediction 53 70 - -
Lele03g0380 939 Pfam Fibronectin type III-like domain 863 930 IPR026891 -
Lele03g0380 939 FunFam probable beta-D-xylosidase 2 549 797 - -
Lele03g0380 939 SMART Fn3_like_2 862 932 IPR026891 -
Lele03g0380 939 Gene3D - 215 537 IPR036962 GO:0004553|GO:0005975
Lele03g0380 939 PRINTS Glycosyl hydrolase family 3 signature 444 462 IPR001764 GO:0004553|GO:0005975
Lele03g0380 939 PRINTS Glycosyl hydrolase family 3 signature 276 295 IPR001764 GO:0004553|GO:0005975
Lele03g0380 939 PRINTS Glycosyl hydrolase family 3 signature 370 386 IPR001764 GO:0004553|GO:0005975
Lele03g0380 939 SUPERFAMILY (Trans)glycosidases 203 562 IPR017853 -
Lele03g0380 939 MobiDBLite consensus disorder prediction 99 123 - -
Lele03g0380 939 PANTHER SUGAR HYDROLASE-RELATED 180 935 IPR044993 GO:0009044|GO:0045493
Lele03g0380 939 Pfam Glycosyl hydrolase family 3 N terminal domain 270 520 IPR001764 GO:0004553|GO:0005975
Lele03g0380 939 MobiDBLite consensus disorder prediction 15 37 - -
Lele03g0380 939 MobiDBLite consensus disorder prediction 1 70 - -
Lele03g0380 939 Pfam Glycosyl hydrolase family 3 C-terminal domain 564 796 IPR002772 GO:0004553|GO:0005975
Lele03g0380 939 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 564 799 IPR036881 GO:0004553|GO:0005975
Lele03g0380 939 FunFam probable beta-D-xylosidase 7 215 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0380 Lele-ChrLele03 2192833 2203776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0380 189 937 Glycoside Hydrolase AT1G78060 66.090 0.0 1019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0380 03 2192833 2203776 Lele25g0342 25 2089314 2094486 CCT
Lele03g0380 03 2192833 2203776 Lele26g0360 26 2171766 2176224 CCT
Lele03g0380 03 2192833 2203776 Lele27g1739 27 22646434 22651326 CCT
Lele03g0380 03 2192833 2203776 Lele28g0358 28 2192375 2196859 CCT
Lele03g0380 03 2192833 2203776 Lele03g0380 03 2192833 2203776 ECH
Lele01g0374 01 2170894 2175718 Lele03g0380 03 2192833 2203776 hybridization
Lele02g0369 02 2143236 2150210 Lele03g0380 03 2192833 2203776 hybridization