Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele03g0378 | ATGCTCGCTGCTGTAACTCTGTCATCTTCTTCTTCAGACCTTCTTGTAATAAACTCTACACATTTCTACATCACCTCCTCGTTTACATCGCCACCTCTATATAAGCAGAGAATGGCTGCTAAAGTCTGTCACCAGGCTATTGGTACTTTTCAGTCTGAGTCGCTTCTTAAAAATTCTAAAAATCACCAAAATCTTCAGAAGAACTCAATAAGATTGATAGCAAAGGATTTTAGCAGCTGCAACAGCTTGTCAAGGAGAGCTGATCAGAGGAATTGTTGCATAATCCGATCCTCAGCTTCTCAAACTTCGGTGGTTGATCCAGTGTTATCCCCTTCAAGAAGCAGCACAAGTGACAGTTCCAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACATGGCGAATCATTATGGAATGAAAAGAATTTATTCACAGGCTGCGTAGATGTCCCACTAAGCAAGAAGGGCATAGATGAGGCGATTGAAGCTGGCAAAAGGATCAGTAGCATTCCTGTTGATGTCATATTTACATCTGCTCTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAGCACCGTCGAAGAAAGGTGCCTATCATCATACACAATGAGAGTGAACAAGCAAGAGCATGGAGCCAAGTATTTAGTGAAGATACAAAAAAGCAATCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGAGAGCTACAGGGTCTTAACAAGCAGGAAACAGCTGATAGATATGGGAAAGAACAAGTCCATGAATGGCGCCGAAGCTATGATACACCTCCTCCAAATGGTGAGAGTTTGGAAATGTGTGCTGAAAGGGCAGTTGCTTATTTCAGAGAGCAGATTGAACCCCAGCTTTCATCTGGAAAAAATGTTATGATTGCTGCTCATGGGAATTCATTGAGATCCATTATCATGTATCTTGACAAACTAACTTCCCAAGAGGTCATTAGCTTGGAATTATCCACTGGAATTCCCATGCTTTATATTTTCAAAGAAGGAAGATTCATTAGAAGGGGGAGTCCCATAGGACCAACTGAAGCTGGAGTTTATGCCTATACTAGGGGAATGCGTCCTGCATTGTCTGCTGCATCACGTTAG | 1128 | 0.4211 | MLAAVTLSSSSSDLLVINSTHFYITSSFTSPPLYKQRMAAKVCHQAIGTFQSESLLKNSKNHQNLQKNSIRLIAKDFSSCNSLSRRADQRNCCIIRSSASQTSVVDPVLSPSRSSTSDSSKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRRKVPIIIHNESEQARAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDTPPPNGESLEMCAERAVAYFREQIEPQLSSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPIGPTEAGVYAYTRGMRPALSAASR | 375 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele03g0378 | 375 | CDD | HP_PGM_like | 128 | 347 | IPR013078 | - | |
Lele03g0378 | 375 | PANTHER | PHOSPHOGLYCERATE MUTASE | 116 | 365 | IPR005952 | GO:0004619|GO:0006096|GO:0016868 | |
Lele03g0378 | 375 | ProSitePatterns | Phosphoglycerate mutase family phosphohistidine signature. | 130 | 139 | IPR001345 | GO:0003824 | |
Lele03g0378 | 375 | SMART | PGAM_5 | 127 | 313 | IPR013078 | - | |
Lele03g0378 | 375 | Pfam | Histidine phosphatase superfamily (branch 1) | 128 | 204 | IPR013078 | - | |
Lele03g0378 | 375 | Pfam | Histidine phosphatase superfamily (branch 1) | 223 | 331 | IPR013078 | - | |
Lele03g0378 | 375 | Hamap | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. | 125 | 352 | IPR005952 | GO:0004619|GO:0006096|GO:0016868 | |
Lele03g0378 | 375 | Gene3D | - | 117 | 348 | IPR029033 | - | |
Lele03g0378 | 375 | SUPERFAMILY | Phosphoglycerate mutase-like | 128 | 344 | IPR029033 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele03g0378 | Lele-ChrLele03 | 2181580 | 2184913 | Dispersed/Wgd |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele26g0340 | 26 | 2031169 | 2032701 | Lele03g0378 | 03 | 2181580 | 2184913 | CCT | |
Lele27g1760 | 27 | 22768952 | 22771602 | Lele03g0378 | 03 | 2181580 | 2184913 | CCT | |
Lele03g0378 | 03 | 2181580 | 2184913 | Lele03g0378 | 03 | 2181580 | 2184913 | ECH | |
Lele01g0372 | 01 | 2161731 | 2164339 | Lele03g0378 | 03 | 2181580 | 2184913 | hybridization | |
Lele02g0367 | 02 | 2131943 | 2136831 | Lele03g0378 | 03 | 2181580 | 2184913 | hybridization |