Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0374 ATGGCTGGCGCCGGGCACGGGAATGTATTCATAAATGGTACACTACCAAATAGGCATTCTGCTTCAATCTCTGTAGTAGACGAGTTCTGCCACGCACTTGGAGGAAAGAGGCCAATTCATAGCATACTAATTGCAAACAATGGAATGGCAGCAGTCAAGTTTATACGTAGTGTTAGGACCTGGGCCTATGAGACATTTGGCACAGAGAAGGCAATCTTGTTGGTTGCCATGGCTACTCCAGAGGACATGAGAATCAATGCGGAACACATCAGAATGGCCGATCAATTTGTCGAAGTTCCTGGTGGGACAAATAACAATAACTATGCCAATGTACAACTCATTGTTGAGGTGGCCGAGATAACTCATGTTGATGCAGTGTGGCCTGGTTGGGGTCATGCATCAGAGAATCCTGAACTGCCAGATGCATTAAATGCAAAAGGAATTGTCTTTCTTGGACCCCCTTCTGTATCTATGGCAGCGTTAGGAGATAAAATTGGTTCGTCATTGATTGCTCAAGCAGCAGACGTACCAACCCTTCCATGGAGTGGTTCTCATGTGAAAATTCCTCCTGAAAATTGCTTAATTACTATTCCTGATGATATTTACCGACAAGCATGTGTCTACACAACAGACGAAGCAATTGCTAGTTGTCAAGTTGTAGGTTACCCTGCAATGATCAAGGCCTCTTGGGGTGGTGGTGGTAAAGGCATAAGAAAGGTTCATAATGATGATGAGGTCAGGGCATTGTTCAAGCAAGTTCAAGGGGAAGTTCCAGGCTCTCCCATATTCATAATGAAGTTAGCATCCCAGAGCCGACATTTGGAAGTCCAGTTACTTTGTGATCAGTATGGAAATGTTGCTGCTTTGCATAGTCGTGATTGCAGTGTTCAAAGGAGGCACCAAAAAATTATTGAAGAGGGACCGATTACTGTAGCTCCTCCAGATACAGTGAAAAAACTGGAACAGGCGGCTAGAAGATTGGCTAAAAGCGTAAATTATGTTGGCGCAGCTACAGTTGAGTATCTATTCAGCATGGAGACCGGCGAGTACTACTTTTTGGAGCTGAACCCCCGATTGCAGGTTGAACATCCTGTTACTGAGTGGATAGCAGAGATAAATCTGCCAGCAGCACAAGTTGCTGTTGGGATGGGCATCCCTCTTTGGCAAATTCCTGAGATAAGGCGTTTCTACGGGGTGGAACATGGTGGGGGTTATGATGCTTGGAGTAAAACATCAGCTTTAGCCACTCCTTTTGATTTTGACAAAGATGAATCTACAAGGCCAAAAGGTCATTGTGTGGCTGTACGGGTGACAAGTGAGGATCCTGATGATGGTTTTAAGCCTACAAGTGGGAAAGTTCTGGAGCTGAGCTTTAAAAGTAAGCCGAATGTGTGGGCATACTTCTCTGTTAAGTCCGGAGGAGGAATTCATGAATTCTCAGATTCTCAGTTTGGGCATGTTTTTGCATTTGGAGAATCTAGGGCTTTAGCAATTGCAAATATGGTTCTTGGGCTGAAGGAGGTTCAAATTCGGGGAGAAATTCGTACCAATGTTGATTATACTATAGATCTTTTAAATGCTTCAGACTACAGAGAAAACAAAATCCACACGGGATGGTTGGACAGTAGAATTGCAATGAGGGTTAGGGCAGAAAGGCCACCTTGGTATCTTTCTGTTGTTGGAGGGGCACTCTATAAAGCTTCTGCTAGCAGTGCAGCTTTGGTTTCAGACTATGTTGGCTATCTTGAAAAGGGACAGATCCCTCCCAAGCACATATCTCTTGTCCACTCTCTAGTGTCTTTGAACATTGAAGGAAGCAAATATACGATTGACATGGTAAGAGGAGGACCAGGAAGTTATAGATTGAGAATGAATGAATCAGAAATAGAAGCAGAGATACATACTTTACGGGATGGAGGTTTACTAATGCAGTTGGATGGAAACAGTCATGTGATATATGCGGAGGAAGAGGCAGCTGGAACTCGTCTTCTAATAGATGGAAGAACTTGCTTGCTCCAGAATGATCACGATCCATCAAAATTAGTTGCAGAGACACCGTGCAAGCTTCTGAGATATTTGGTTACAGATGATAGTCATATTGATGCAGACTCACCATATGCAGAGGTTGAGGTCATGAAGATGTGTATGCCTCTTCTCTCACCTGCTTCTGGAGTTATTCATTTTAAAATGACCGAAGGTCAAGCAATGCAGGCTGGTGAACTTATAGCAAGGCTTGATTTAGACGATCCTTCAGCTGTAAGAAAAGCAGAACCTTTTCATGGGAGCTTCCCAGTTTTGGGTCCTCCTACTGCAATTCCTGGTAAAGTTCATCAGAAATGTGCTGCAAGTTTAAATGTAGCACGCATGATTCTGGCTGGCTATGAGCATAATATTGAGGAAGTTGTGCAAAGTTTACTCTATTGCCTTGATAGTCCCGAATTGCCTTTCCTTCAATGGCAAGAGTGCCTGGCTGTTTTGGCAACTCGTCTTCCCAAAGATCTCAAAAATGAGTTGGAATCAAAATACAAAGAGTTTGAGAGGATTTCAAACTCCCAAAATGTTGACTTCCCCGCCAAATTATTGAAGGGAATCCTTGATGATCATCTTTCCTCCTGTCCTGACAAAGAAAAAGGAGCCCAAGAAAGGCTTGTTGAACCTCTGATGAGTCTGGTGAAGTCTTATGAAGGGGGACGAGAGAGCCATGCCCGGATTATTGTTCAATCCCTTTTTGAAGAGTATCTTTCTGTTGAAGAACTGTTTAGTGATAACATACAGGCTGATGTAATTGAACGCCTTCGTCTTCAATACAAGAAAGATCTACTCAAGATTGTGGATATAGTGCTCTCTCACCAGGGTGTCAAAAGTAAAAATAAGCTCATACTGCGATTAATGGAACAACTGGTTTACCCTAACCCTGCTGCCTACAGGGATCAATTGATCCGTTTCTCTGCACTCAACCATACAAATTATTCTGAGTTGGCTCTTAAGGCAAGTCAATTGCTGGAACAAACTAAATTGAGCGAACTTCGTTCTAGCATTGCTAGAAGTCTTTCTGAACTAGAGATGTTCACTGAGGATGGTGAAAATATTGATACTCCCAGGAGGAAGAGTGCCATTAATGATCGAATGGAGGACCTTGTGAGTGCCCCTTTGGCAGTTGAAGATGCCCTTGTAGGTTTGTTTGATCACAGTGATCATACTCTTCAAAGGCGGGTTGTGGAAACTTATATTCGCAGGCTGTACCAGCCATATCTTGTCAAAGGGAGTGTTAGGATGCAGTGGCACAGATCTGGCCTTATTGCTTCATGGGAGTTCTTGGAAGAATATGTCGAAAGGAAGAGCGGAACTGAAGACCAAATGTCTGATAAAGCATCGTTGGAGAAACATAGTAAGAGAAAATGGGGAGTGATGGCTATAATTAAATCTCTTCAATTTTTGCCTGCAATAATCAGTGCTGCGTTAAGGGAAGCAACACATAACTTTCATGGAGCACTTCCAAATAGTTCTGCTGAACTGGTTGACTATGGTAATATGATGCATATTGCATTGGTAGGAATCAACAATCAGATGAGTTTACTGCAGGACAGTGGAGACGAGGATCAGGCTCAAGAAAGGATCAATAAGTTAGCCAAAATACTCAAGGAAAAGGACGTAGGCTCCACTATACATGCTGCAGGTGTAGGAGTAATTAATTGTATCATACAGAGGGATGAAGGGCGGGCCCCTATGAGGCACTCCTTTTACTGGTCAGCAGAAAAGCTATACTATGCGGAGGAGCCCTTGTTGCGTCATCTAGAACCTCCCCTATCCATATATCTTGAATTGGACAAACTTAAAGGCTATGATAATATACGGTATACTCCATCCCGAGATCGTCAGTGGCACTTGTACACAGTTATAGATCATAAGCCTCAACCGATTCAAAGAATGTTTCTCCGAACACTTGTAAGGCAACCGGTTACAAGTGATGGATTCTCTTCGTATCAAGGGCTAGATGCAGAAACATCTCGTGCCCAATTGACTATGCCTTTTACTTCAAGGAGCATTTTGAGGTCCTTGATGGCTGCAATGGAGGAGTTGGAACTTAATTCACACAATGCCACTGTCAGACCTGAACATGCTCATATGTACCTCTATATTATACGAGAGCAACAAATTAGTGATCTTTTGCCTTACACAAGGAGAACTGACATAAACGCTGACCAAGACGAAACAGCAGTTGAGGCAATATTGGAAGAACTGTCACTTGAAATCCATTCTTTTGTTGGTGTAAGAATGCACAGATTAGGTGTTGCTGAGTGGGAAGTCAAACTCTGGATGGCATCTTCTGGACCTGCAAATGGAGCTTGGAGGATTATTGTAACTAATGTGACTGGCCATACATGCACTGTACATATATACCGAGAACTGGAGGATACTAGCACACACAAGGTGATATACAGTTCAGTCACTGCAAAGGGTCCTCTGCATGGTGTACCCGTGAATGAAAACTATCAACCTTTGGGATTCATTGAGCGAAAACGTCTTGTAGCAAGGAAGAACAACACCACATATTGCTATGATTTTCCACTGGCATTTGAAACAGCTTTGGAGCAATCATGGACAATCCAATACCCAGGATTTCAAAAGGCTAAAGATAAAGTTCTTCTAAAAGTAACAGAGCTGAAGTTCGCTGATAAGGAGGGCAATTGGGGTACCCCTCTTGTTCCTGTGGAGCGTCCCCCTGGACTCAATGATGTAGGCATGGTGGCCTGGGTAATGGAAATGTGTACTCCTGAGTTCTCAAATGGAAGGACAATCTTAGTTGTAGCAAATGACGTGACCTTTAAGGCTGGTTCTTTTGGCCCAAGAGAGGATGCGTTCTTTCATGCAGTAACTGATCTTGCGTGTAAGAAAAGATTGCCATTGATTTACCTAGCAGCAAATTCTGGTGCCCGTTTAGGTGTAGCTGAGGAAGTCAAAGCTTGTTTCAGAGTTGGCTGGTCTGATGAATCTAACCCTGAACATGGTTTGCAGTATGTATATTTAACACCTGAGGATTATGCTAGGATTGGATCATCAGTGATAGCAAACGAGTTAAAGCTGGAAAGTGGAGAAACCAGATGGATAATTGATAGCATTGTTGGGAAAGAGGATGGTCTAGGGGTTGAAAACCTAAGTGGTAGTGGAGCCATTGCTAGTGCCTATTCAAGGGCTTATAAGGAAACTTTCACCCTGACATATGTGACTGGAAGAACAGTGGGAATTGGGGCTTATCTTGCTAGGCTGGGAATGAGGTGCATACAGAGGCTTGATCAACCCATTATTCTTACTGGTTTTTCTGCATTGAACAAACTCCTTGGTCGGGAGGTATACAGTTCTCACATGCAACTTGGTGGGCCTAAGATCATGGCAACAAATGGAGTCGTTCATCTTACTGTTTCAGATGATCTTGAAGGTGTTTCTGCTATTTTGAGGTGGCTCAGCTACATTCCTTCTCATGTTGGCGGCTCACTTCCCATTGTTCAACCCCAAGATCCTCCAGAAAGACCAGTGGAGTATTCCCCAGAGAACTCATGTGATCCTCGTGCTGCCATCTGTGGTTCTGTGGATAGTAATGGGAAATGGCTGGGTGGGATTTTTGACAAGGAAAGCTTTGTGGAGACGCTAGATGGATGGGCCAGGACAGTTGTTACGGGAAGGGCAAAGCTTGGAGGAATCCCTGTGGGAATTGTTGCTGTTGAAACGCAGACAGTGATGCAAGTTATACCAGCTGATCCAGGTCAGCTTGATTCTCATGAAAGGGTGGTTCCTCAGGCTGGGCAGGTCTGGTTTCCTGATTCTGCAACTAAGACAGCGCAATCAATACTAGATTTCAACAGAGAAGAGCTACCACTTTTCATTCTTGCAAATTGGAGAGGTTTTTCAGGTGGTCAGAGGGACCTTTTTGAAGGGATCCTTCAAGCTGGATCAAACATTGTGGAGAACCTTCGAACATACAAGCAACCTGTATTTGTTTATATCCCTATGATGGGTGAACTCCGTGGTGGGGCATGGGTTGTTGTAGACAGCCGAATTAATTCAGACCACATTGAAATGTATGCTGATCGCACAGCTAAAGGGAATGTTCTTGAGCCGGAAGGGATGATAGAGATCAAATTTAGGACAAAGGAATTACTGGAGTGCATGGGTAGACTTGACCAGCAGCTGATAAACCTGAAAGAAAAATTGCAGGAAGCCAAGAGTAACAGGGCTATAGGGACCATAGATTCCCTCCAGCAGCAGATTAAATCCCGGGAGAAACAGCTTTTGCCTGTGTATACGCAGATAGCTACCAAATTTGCTGAATTACACGACACCTCCTTAAGAATGGCTGCAAAGGGTGTAATAAGAGAAGTTCTGGACTGGCGTAACTCCCGCTCTTTCCTGTACCGGAGACTGCAGAGGAGAATTGGTGAGCATTCGCTGGCAAACAGAGTCAGAGACGCTGCTGGTGATCATATGTCTAAGATGGCTGCAATGGAGTTTATCAAAAATTGGTATTTGAATTCTGATATTGCTAAAGGGAGAGATGATGCTTGGTTGGATGATGAGGCTTTCTTCACATGGAAGAATGAACAGCAGAATTACGAGGATAAATTAAAGGAATTGCGCGCCCAAAAGGTGCTGCTTCAACTGACAAATATTGGCGATTCTGTTTTGGATGTGGAAGCTTTACCTCAAGGTCTTGCTGCTCTTTTAATCAAGTTGGAACCATCAAACCGTGCGAAATTGATCGATGAACTCCGGAAGGTGCTTGGTTAG 6783 0.4367 MAGAGHGNVFINGTLPNRHSASISVVDEFCHALGGKRPIHSILIANNGMAAVKFIRSVRTWAYETFGTEKAILLVAMATPEDMRINAEHIRMADQFVEVPGGTNNNNYANVQLIVEVAEITHVDAVWPGWGHASENPELPDALNAKGIVFLGPPSVSMAALGDKIGSSLIAQAADVPTLPWSGSHVKIPPENCLITIPDDIYRQACVYTTDEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKLASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPPDTVKKLEQAARRLAKSVNYVGAATVEYLFSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIRRFYGVEHGGGYDAWSKTSALATPFDFDKDESTRPKGHCVAVRVTSEDPDDGFKPTSGKVLELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEVQIRGEIRTNVDYTIDLLNASDYRENKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYKASASSAALVSDYVGYLEKGQIPPKHISLVHSLVSLNIEGSKYTIDMVRGGPGSYRLRMNESEIEAEIHTLRDGGLLMQLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVTDDSHIDADSPYAEVEVMKMCMPLLSPASGVIHFKMTEGQAMQAGELIARLDLDDPSAVRKAEPFHGSFPVLGPPTAIPGKVHQKCAASLNVARMILAGYEHNIEEVVQSLLYCLDSPELPFLQWQECLAVLATRLPKDLKNELESKYKEFERISNSQNVDFPAKLLKGILDDHLSSCPDKEKGAQERLVEPLMSLVKSYEGGRESHARIIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGVKSKNKLILRLMEQLVYPNPAAYRDQLIRFSALNHTNYSELALKASQLLEQTKLSELRSSIARSLSELEMFTEDGENIDTPRRKSAINDRMEDLVSAPLAVEDALVGLFDHSDHTLQRRVVETYIRRLYQPYLVKGSVRMQWHRSGLIASWEFLEEYVERKSGTEDQMSDKASLEKHSKRKWGVMAIIKSLQFLPAIISAALREATHNFHGALPNSSAELVDYGNMMHIALVGINNQMSLLQDSGDEDQAQERINKLAKILKEKDVGSTIHAAGVGVINCIIQRDEGRAPMRHSFYWSAEKLYYAEEPLLRHLEPPLSIYLELDKLKGYDNIRYTPSRDRQWHLYTVIDHKPQPIQRMFLRTLVRQPVTSDGFSSYQGLDAETSRAQLTMPFTSRSILRSLMAAMEELELNSHNATVRPEHAHMYLYIIREQQISDLLPYTRRTDINADQDETAVEAILEELSLEIHSFVGVRMHRLGVAEWEVKLWMASSGPANGAWRIIVTNVTGHTCTVHIYRELEDTSTHKVIYSSVTAKGPLHGVPVNENYQPLGFIERKRLVARKNNTTYCYDFPLAFETALEQSWTIQYPGFQKAKDKVLLKVTELKFADKEGNWGTPLVPVERPPGLNDVGMVAWVMEMCTPEFSNGRTILVVANDVTFKAGSFGPREDAFFHAVTDLACKKRLPLIYLAANSGARLGVAEEVKACFRVGWSDESNPEHGLQYVYLTPEDYARIGSSVIANELKLESGETRWIIDSIVGKEDGLGVENLSGSGAIASAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAILRWLSYIPSHVGGSLPIVQPQDPPERPVEYSPENSCDPRAAICGSVDSNGKWLGGIFDKESFVETLDGWARTVVTGRAKLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQSILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSNIVENLRTYKQPVFVYIPMMGELRGGAWVVVDSRINSDHIEMYADRTAKGNVLEPEGMIEIKFRTKELLECMGRLDQQLINLKEKLQEAKSNRAIGTIDSLQQQIKSREKQLLPVYTQIATKFAELHDTSLRMAAKGVIREVLDWRNSRSFLYRRLQRRIGEHSLANRVRDAAGDHMSKMAAMEFIKNWYLNSDIAKGRDDAWLDDEAFFTWKNEQQNYEDKLKELRAQKVLLQLTNIGDSVLDVEALPQGLAALLIKLEPSNRAKLIDELRKVLG 2260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0374 2260 Gene3D - 9 163 - -
Lele03g0374 2260 ProSiteProfiles ATP-grasp fold profile. 191 383 IPR011761 GO:0005524|GO:0046872
Lele03g0374 2260 FunFam acetyl-CoA carboxylase 1-like 269 527 - -
Lele03g0374 2260 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Lele03g0374 2260 SUPERFAMILY PreATP-grasp domain 17 161 IPR016185 -
Lele03g0374 2260 Gene3D Biotin dependent carboxylase carboxyltransferase 1648 1712 - -
Lele03g0374 2260 Gene3D - 1830 2230 - -
Lele03g0374 2260 SUPERFAMILY ClpP/crotonase 1831 2221 IPR029045 -
Lele03g0374 2260 Gene3D - 676 747 - -
Lele03g0374 2260 SUPERFAMILY Single hybrid motif 678 748 IPR011053 -
Lele03g0374 2260 ProSiteProfiles Biotin carboxylation domain profile. 38 545 IPR011764 -
Lele03g0374 2260 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 388 IPR005479 GO:0005524
Lele03g0374 2260 Pfam Biotin-requiring enzyme 680 745 IPR000089 -
Lele03g0374 2260 Pfam Biotin carboxylase C-terminal domain 435 541 IPR005482 -
Lele03g0374 2260 Gene3D - 206 268 IPR013815 GO:0005524
Lele03g0374 2260 SUPERFAMILY ClpP/crotonase 1504 1826 IPR029045 -
Lele03g0374 2260 Coils Coil 2193 2220 - -
Lele03g0374 2260 FunFam Acetyl-CoA carboxylase 1 676 747 - -
Lele03g0374 2260 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Lele03g0374 2260 Pfam Acetyl-CoA carboxylase, central region 746 1490 IPR013537 GO:0003989|GO:0005524|GO:0006633
Lele03g0374 2260 Gene3D - 269 527 - -
Lele03g0374 2260 CDD biotinyl_domain 681 745 - -
Lele03g0374 2260 ProSiteProfiles Biotinyl/lipoyl domain profile. 672 746 IPR000089 -
Lele03g0374 2260 Coils Coil 2056 2076 - -
Lele03g0374 2260 FunFam acetyl-CoA carboxylase isoform X2 13 163 - -
Lele03g0374 2260 Pfam Carboxyl transferase domain 1592 2144 IPR034733 -
Lele03g0374 2260 Gene3D - 1498 1825 - -
Lele03g0374 2260 SUPERFAMILY Rudiment single hybrid motif 429 542 IPR011054 -
Lele03g0374 2260 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1497 1836 IPR011762 -
Lele03g0374 2260 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1840 2155 IPR011763 GO:0016874
Lele03g0374 2260 FunFam acetyl-CoA carboxylase isoform X2 1830 2230 - -
Lele03g0374 2260 FunFam acetyl-CoA carboxylase isoform X1 182 267 - -
Lele03g0374 2260 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 16 2258 - -
Lele03g0374 2260 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 400 - -
Lele03g0374 2260 Coils Coil 1350 1370 - -
Lele03g0374 2260 SMART Biotin_carb_C_2 434 541 IPR005482 -
Lele03g0374 2260 Gene3D - 164 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0374 Lele-ChrLele03 2143212 2155455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0374 1 2260 Acyl Lipid Metabolism Gene Families AT1G36160 80.910 0.0 3836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0374 03 2143212 2155455 Lele25g0336 25 2045115 2046978 CCT
Lele03g0374 03 2143212 2155455 Lele26g0353 26 2124665 2126556 CCT
Lele03g0374 03 2143212 2155455 Lele27g1747 27 22700034 22701896 CCT
Lele03g0374 03 2143212 2155455 Lele28g0352 28 2143541 2145360 CCT
Lele03g0374 03 2143212 2155455 Lele03g0374 03 2143212 2155455 ECH
Lele01g0368 01 2127940 2140654 Lele03g0374 03 2143212 2155455 hybridization
Lele02g0362 02 2098539 2111002 Lele03g0374 03 2143212 2155455 hybridization