Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0371 ATGGGGGGTCCAGCTGATGAAACCCATAAAACAAAAGAGAAGGATGCTAGAAGTGTGTCGTCTTCACAGGGTCAGGCACCACCACTTCACAAAGTAGGAATTCCTCCGCGACAGAAACTGTTCAAGGAATTCCAATCCCTTGTCAAAGAAACATTCTTTGCTGATGATCCTCTCCGCTCTTTCAAAGACCAGACTATATTTCGGAAATTCATCCTCGGCATTGAGGCCGTATTCCCCATTCTTAACTGGGGCAGAAATTACAATGCTGTCAAATTCAGAGGAGATCTCATAGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGATATTGGGTATGCAAAGCTTGCAAATTTGGCTCCAGAGTACGGGCTGTATTCCAGCTTTGTCCCTCCACTGATTTATGCTATCATGGGTAGTTCTCGTGATATCGCCATAGGACCTGTTGTTTATTTGCATTTAACTTATGGTTGGATTTGTTCTGGGATCAGGTTAGGTTTTTTGATCGACTTCCTCTCCCATGCTGCTATTGTCGGTTTTATGGCTGGAGCTGCTATCACCATTGCCCTTCAACAGCTTAAAGGTTTCCTTGGCATTAAGAAGTTCACAAAGAAAACTGAGGTTGTGTCTGTGTTGCATTCAGTATTCTCAACAGCCCATCATGGTTGGAACTGGCAGACTATAGTTCTAGGAGCAAGCTTTTTGTTTTTTCTGCTGACTGCAAGATATATCGGCAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCCATAGCCCCGCTGATATCTGTTGTTCTCTCCACTTTAATTGTGTTCGTAACCCGTGCAGACAAGGAAGGTGTTGGAATTGTAAAATATATAAAGAAGGGGATCAATCCTTCATCTGTTGAAGAGATATATTTTAGTGGTGATTTCCTTGGGAAAGGTTTCAAGATTGGCATCATGGCTGGCATGATAGCATTGACAGAAGCCACAGCAATAGGAAGAACATTTGCTTCTATGAAGGATTATCATTTGGATGGAAATAAGGAAATGACAGCATTAGGAGCTATGAACATTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCTTTTTCTCGGTCAGCGGTGAATTACATGGCTGGCTGCCAAACTGCAGTCTCAAATATTATTATGTCCATTGTTGTGTTCTTAACCCTTCAATTCATTACACCTCTCTTCAAGTATACCCCAAATGCCATTCTTTCTTCCATCATCATATCTGCTGTAATTGGCCTCGTGGACTATCAGGCAGCAATCTTAATTTGGAAGATTGATAAGTTTGATTTTATTGCTTGCATGGGAGCCTTCTTTGGGGTTGTTTTTGTCTCAGTTGAGATAGGGCTTTTAATAGCTGTCACTATATCCTTTGCTAAAATCCTATTACAAGTTACCAGACCTCGAACAGCTATTCTGGGGAAGATTCCTGGGACAACTGTCTATAGAAATACCCAACAATACCCGGAGGCCACAAAGGTTCCTGGTGTGCTGGTTGTAAGAATTGATTCTGCAATATACTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTGAGATGGTTGATGGATGAGGAAGAAATAGTGAAAAGAGACTACCAAACACAAATCAAATTTTTTATAGTTGAAATGTCGCCGGTTACTGACATTGATACCAGTGGCATTCATGCCTTTGAAGAGTTACACAGAAGTCTTCAAAAGAGAGATGTTCAGCTTGTTCTAGCAAACCCCGGCTCAGTGGTGATAAACAAGCTTCACACATCCAATTTTGCAGATCTTATCGGCGAGGACAAGATCTACCTCACAGTTGCAGATGCTGTTGCATACTGTTCTTCAAAGCTAGCACAAGAGCCTTGA 1875 0.4171 MGGPADETHKTKEKDARSVSSSQGQAPPLHKVGIPPRQKLFKEFQSLVKETFFADDPLRSFKDQTIFRKFILGIEAVFPILNWGRNYNAVKFRGDLIAGLTIASLCIPQDIGYAKLANLAPEYGLYSSFVPPLIYAIMGSSRDIAIGPVVYLHLTYGWICSGIRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKKFTKKTEVVSVLHSVFSTAHHGWNWQTIVLGASFLFFLLTARYIGKKNKKFFWVPAIAPLISVVLSTLIVFVTRADKEGVGIVKYIKKGINPSSVEEIYFSGDFLGKGFKIGIMAGMIALTEATAIGRTFASMKDYHLDGNKEMTALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIIMSIVVFLTLQFITPLFKYTPNAILSSIIISAVIGLVDYQAAILIWKIDKFDFIACMGAFFGVVFVSVEIGLLIAVTISFAKILLQVTRPRTAILGKIPGTTVYRNTQQYPEATKVPGVLVVRIDSAIYFSNSNYVKERILRWLMDEEEIVKRDYQTQIKFFIVEMSPVTDIDTSGIHAFEELHRSLQKRDVQLVLANPGSVVINKLHTSNFADLIGEDKIYLTVADAVAYCSSKLAQEP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0371 624 Gene3D STAS domain 473 621 IPR036513 -
Lele03g0371 624 SUPERFAMILY SpoIIaa-like 495 617 IPR036513 -
Lele03g0371 624 MobiDBLite consensus disorder prediction 1 17 - -
Lele03g0371 624 MobiDBLite consensus disorder prediction 1 33 - -
Lele03g0371 624 FunFam Sulfate transporter 31 473 619 - -
Lele03g0371 624 ProSiteProfiles STAS domain profile. 493 616 IPR002645 -
Lele03g0371 624 PANTHER SULFATE TRANSPORTER 163 617 IPR001902 GO:0016020|GO:0055085
Lele03g0371 624 Pfam STAS domain 494 612 IPR002645 -
Lele03g0371 624 Pfam Sulfate permease family 92 159 IPR011547 GO:0016020
Lele03g0371 624 Pfam Sulfate permease family 163 441 IPR011547 GO:0016020
Lele03g0371 624 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Lele03g0371 624 TIGRFAM sulP: sulfate permease 163 612 IPR001902 GO:0016020|GO:0055085
Lele03g0371 624 CDD STAS_SulP_like_sulfate_transporter 494 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0371 Lele-ChrLele03 2129294 2132641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0371 20 623 Inorganic Solute Cotransporters AT1G22150 70.236 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0331 26 1988675 1991670 Lele03g0371 03 2129294 2132641 CCT
Lele27g1767 27 22810456 22813456 Lele03g0371 03 2129294 2132641 CCT
Lele28g0333 28 2011177 2014160 Lele03g0371 03 2129294 2132641 CCT
Lele03g0371 03 2129294 2132641 Lele03g0371 03 2129294 2132641 ECH
Lele01g0366 01 2118531 2121885 Lele03g0371 03 2129294 2132641 hybridization