Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0366 ATGGAAAAGAAAGAGTTAGTAGAGACAATCGAATCAAATTCCCCTGCTGCTGAAAAGCTGGAAGATGTTCCCATTATACACAATGAAAAGGCCAAACCGCCAGAAGAGGTAAAAAGTCAAAATATTGGCAGCCACGATCTCGCGTCAGACAACAGACAAGATGATATATCTGACAAGACAAATGAGATGGCATATGAGCATGAGAGTAATGTCACGAAAACAGAAACTGAATATAAATCCTTCAATAACGTTGGACAAAATTCCTCCGATGATAATGTTGATGGCAGCAAAGGGTCTGAGTTTACCATTCAAGGAGGAATTGTAGATGTAATTTCTGGACAACATGAATTGGCCAAAGAGACGAGCGAGAGTGGGAACGCGGAATCCACACAAATGAATCAGAAGACAGATGAAATTCCAAGTGAGGACAATAATCTAGAGCCCGTGTTTGACGGAACAGAGGTTTCTGGTATGGAAGCTAACAGAAGCACGGATAATAGTTCTTTAGACTTGAATGCTGATCCAGATACTCATGGTGTGGTTGAGAAGGCTGTGGCACTTAAAAATTTTGTTAGGGAGAGAAGTGCCGTAGCAGTCTCTACTGTGCTACGTCGCCTTTCTGGAAAAGGTGATGAAGGTTCCATGGGCAATTTTGGTGATGAAAGTAAGAATGCTTCTGAATCCTCAAATGTGGACTCTACTGAGAAAAAATCTTGGAACCCCCTAAATTATATTAGGATGTCATTCGAAGCTGAGTCGGGAGGCAAAAATGAATGTATGGAACCAATAACCGGAGGTCCTCAATATCCCATAGTCATGAAAGGAAGGATTATACTCTACACAAGACTAGGGTGCCAGGAATCTAAAAAAGTTAGGCTATTTTTGTATATGAAACGACTTGGGTATGTTGAAATCAATATTGACGTGTACCCCAGTAGAAAGCAGGAGCTTGACAAGATTTCTGGATCTACTTCTGTTCCCAAGGTGTTTTTCAATGAAATACTTATTGGAGGTTTGAATGAGCTAAAGGCCCTGGATGAATCTGATAAGCTCGATGAGAATATTAAATTTCTCATTACTGAAGCGCCGTCAATTGAAGCTCCGCTACCGCCTCTTTCTGGAGAGGGTGATGAGTCTAGTAGTGGAGCTCTCGATGAAATGGCTTTAATTGTCATCAAAATGAAAGAATTTATCGTTGTGAAAGATCGATTTTACAAAATGCGGAGGTTCACTAACTGTTTTCTTGGCTCAGAAGCGGTGGGCTTCTTATCAGAAGATCAATACTTGGAAAGACAGGAGGCTGTTGAATTTGCACGAAATCTTGCTAGCAAATTCTTCTTCCAGCATGTTCTTGATGAGAATCTATTTGAGGATGGTAACCACTTGTATCGTTTTTTGGATGATGACCCGGTTGTGGCTTTTCAATGTCACAATATTTCGAGGGGCATAACCACTGTGAAGCCGAAGTCTATAATAGAAATCGCATCAAGGCTAAGGTTTTTGTCTCATGCAATATTTGAAGCCTATGTTTCTGAAGATGGACATCATGTTAATTACAGAAGTCTCCATGGAAGCGAGGAGTTTGCGAGGTATCTGAGAATAGTAGAGGAGCTCCAAAGAGTGGAAATATTGGATTTGTCTAGAGAAGATAAGCTAGCTTTCTTTATCAATCTTTATAATATGATGGCCATTCATGCAATCTTAGAATGGGGTCACCCAGCTGGAGCACTGGAAAGAAGAAAATTGTTTGGAGATTTCAAATATGTGATTGGTGGGTCCACTTACTCACTTTCAACCATTCAAAATGGCATTTTAAGGGGAAACCAGCGGCCACCGTACAATCTTATGAAGCCATTTGGTGCAAAAGATAAACGTACGAGGGTGGCTCTTCCTTACCCTGAACCTCTTGTCCATTTTGCTTTAGTATGCGGTACCAGATCTGGGCCCGCCCTTAGATGCTATTCTCCTCGAGATATTGACAAAGAATTAATGGACTCAGCTCGCAATTTCTTGAGAAGTGGAGGACTTCTCATTGATTTGAATACGAAGGTTGCATATGCTAGTAAGATCCTTAAGTGGTTTAGTATAGATTTTGGCAAGAACGATGCAGAGGTACTGAGGCATGCGTCAAACTACTTAGACCCAGCTGACGCAGCAGTATTGTTGGATCTGCTCGCCACTTCTGAATTGAAGGTGATTCATGTCCCTTATGATTGGGGTTTAAACTACTAA 2232 0.4113 MEKKELVETIESNSPAAEKLEDVPIIHNEKAKPPEEVKSQNIGSHDLASDNRQDDISDKTNEMAYEHESNVTKTETEYKSFNNVGQNSSDDNVDGSKGSEFTIQGGIVDVISGQHELAKETSESGNAESTQMNQKTDEIPSEDNNLEPVFDGTEVSGMEANRSTDNSSLDLNADPDTHGVVEKAVALKNFVRERSAVAVSTVLRRLSGKGDEGSMGNFGDESKNASESSNVDSTEKKSWNPLNYIRMSFEAESGGKNECMEPITGGPQYPIVMKGRIILYTRLGCQESKKVRLFLYMKRLGYVEINIDVYPSRKQELDKISGSTSVPKVFFNEILIGGLNELKALDESDKLDENIKFLITEAPSIEAPLPPLSGEGDESSSGALDEMALIVIKMKEFIVVKDRFYKMRRFTNCFLGSEAVGFLSEDQYLERQEAVEFARNLASKFFFQHVLDENLFEDGNHLYRFLDDDPVVAFQCHNISRGITTVKPKSIIEIASRLRFLSHAIFEAYVSEDGHHVNYRSLHGSEEFARYLRIVEELQRVEILDLSREDKLAFFINLYNMMAIHAILEWGHPAGALERRKLFGDFKYVIGGSTYSLSTIQNGILRGNQRPPYNLMKPFGAKDKRTRVALPYPEPLVHFALVCGTRSGPALRCYSPRDIDKELMDSARNFLRSGGLLIDLNTKVAYASKILKWFSIDFGKNDAEVLRHASNYLDPADAAVLLDLLATSELKVIHVPYDWGLNY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0366 743 MobiDBLite consensus disorder prediction 48 74 - -
Lele03g0366 743 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 29 742 - -
Lele03g0366 743 ProSiteProfiles DEP domain profile. 394 467 IPR000591 GO:0035556
Lele03g0366 743 ProSiteProfiles Glutaredoxin domain profile. 265 362 - -
Lele03g0366 743 SUPERFAMILY Thioredoxin-like 272 356 IPR036249 -
Lele03g0366 743 CDD DEP 390 464 - -
Lele03g0366 743 Gene3D - 385 519 IPR036388 -
Lele03g0366 743 MobiDBLite consensus disorder prediction 117 139 - -
Lele03g0366 743 MobiDBLite consensus disorder prediction 209 236 - -
Lele03g0366 743 Pfam Protein of unknown function, DUF547 545 671 IPR006869 -
Lele03g0366 743 Gene3D Glutaredoxin 271 357 - -
Lele03g0366 743 SUPERFAMILY "Winged helix" DNA-binding domain 390 474 IPR036390 -
Lele03g0366 743 MobiDBLite consensus disorder prediction 22 36 - -
Lele03g0366 743 MobiDBLite consensus disorder prediction 116 151 - -
Lele03g0366 743 SMART DEP_3 394 467 IPR000591 GO:0035556
Lele03g0366 743 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 399 465 IPR000591 GO:0035556
Lele03g0366 743 MobiDBLite consensus disorder prediction 1 100 - -
Lele03g0366 743 Pfam Glutaredoxin 277 333 IPR002109 -
Lele03g0366 743 MobiDBLite consensus disorder prediction 219 236 - -
Lele03g0366 743 MobiDBLite consensus disorder prediction 75 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0366 Lele-ChrLele03 2105659 2109345 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0319 26 1906138 1916298 Lele03g0366 03 2105659 2109345 CCT
Lele28g0320 28 1930775 1939915 Lele03g0366 03 2105659 2109345 CCT
Lele03g0366 03 2105659 2109345 Lele03g0366 03 2105659 2109345 ECH
Lele01g0361 01 2093193 2096854 Lele03g0366 03 2105659 2109345 hybridization
Lele02g0354 02 2048478 2052118 Lele03g0366 03 2105659 2109345 hybridization