Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0363 ATGAGTTCTCCATCAACTCAACTTGTCATCTCGAAAAGGATGGGCATATATGAGCCATTCCAGCAAGTTAGCATGTGGGCGGACAACTTTAAAGTTGAAAATAGCCTAAATTCAGGCCCTTCCCAGATATTCATGGTGAACCCTACCACAGAGCCCAAGGCTGAATATATTCCTCATGACTCAGTGGGACACTCAGGAGATGATCAAGAGACCAACACTGCTGTTAGCAAGGTGCTAAGACGCCTGGCACAAAATCGCGAAGCAGCTCGAAAGAGTCGTCAAAGGAAGAAGGCTTATGTCCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAAAAAGCAGGGTATGCATATGAGCGGAGCATTAGATGCTAATTACATAGGATCACCCGGAACAATCAACCCAGGGATTGCAACTTTTGAGATGGAATATAGTCATTGGGTTGAAGAGCAACACAGACAAAATGCAGAACTTAGAAACGTATTGCAAACAGAGTCATCTGATGTGCAGCTTCATCTGCTGGTTGAGAGTGGCTTGAATCATTACTCGAATCTTTTCAGGATGAAAGCTGACGCTGCAAAAGCTGATGTCTTCTACTTAATCTCTGGAGTGTGGAAGGCATCCGTCGAACGCCTCTTCCTCTGGATCGGTGGATCCCGCCCATCTCAGCTTCTTAACATCATCGTGCCACAGGTGGAGGATTTGACGGATCAGCAGAAAGCGAGTTGCACCAAACTCCGGCAATCTTCTCAGCAAGCTGAAGATGCACTTTCACAAGGACTGGATAAACTACAGCAGAATCTGGTCATCAACATGGGAGCCAATGGATTGGACATAGAAAGCTTTGGGTTTCAGATGACTTCTGCCATGGAGACAATTGAAGCACTGGAGAGTTTTGTAAGCCAGGCAGACCACCTTCGACAGCAAACGTTGCAGCATATGTCTCGGATCCTGACACCCCGGCAAGCAGCTCAAGGCTTGCTGATCTTAGGCGAATACTTTCAGCGTCTTCGTGCTCTGAGTTCTCTTTGGTCAGCTCGTCCATGCGACCCCGCATTCCAAACTTGA 1095 0.4676 MSSPSTQLVISKRMGIYEPFQQVSMWADNFKVENSLNSGPSQIFMVNPTTEPKAEYIPHDSVGHSGDDQETNTAVSKVLRRLAQNREAARKSRQRKKAYVQQLETSRLKLMQLELEIEKAKKQGMHMSGALDANYIGSPGTINPGIATFEMEYSHWVEEQHRQNAELRNVLQTESSDVQLHLLVESGLNHYSNLFRMKADAAKADVFYLISGVWKASVERLFLWIGGSRPSQLLNIIVPQVEDLTDQQKASCTKLRQSSQQAEDALSQGLDKLQQNLVINMGANGLDIESFGFQMTSAMETIEALESFVSQADHLRQQTLQHMSRILTPRQAAQGLLILGEYFQRLRALSSLWSARPCDPAFQT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0363 364 Pfam bZIP transcription factor 77 109 IPR004827 GO:0003700|GO:0006355
Lele03g0363 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Lele03g0363 364 Gene3D - 76 130 - -
Lele03g0363 364 Pfam Seed dormancy control 165 238 IPR025422 GO:0006351|GO:0043565
Lele03g0363 364 PANTHER TRANSCRIPTION FACTOR TGA9 1 358 - -
Lele03g0363 364 SUPERFAMILY Leucine zipper domain 77 110 IPR046347 GO:0003700|GO:0006355
Lele03g0363 364 SMART brlzneu 73 133 IPR004827 GO:0003700|GO:0006355
Lele03g0363 364 ProSiteProfiles DOG1 domain profile. 146 356 IPR025422 GO:0006351|GO:0043565
Lele03g0363 364 Coils Coil 96 123 - -
Lele03g0363 364 FunFam BZIP family transcription factor 76 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0363 Lele-ChrLele03 2087623 2089875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0363 2 360 Calmodulin-binding Proteins AT1G77920 56.000 6.07e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele03g0363 DOG1 3.3e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0363 03 2087623 2089875 Lele03g0363 03 2087623 2089875 ECH
Lele01g0357 01 2072861 2075100 Lele03g0363 03 2087623 2089875 hybridization
Lele02g0352 02 2022538 2024812 Lele03g0363 03 2087623 2089875 hybridization