Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0362 ATGAGCAGCCTGAAAACGCTGAGTAGACCGCAACCACTGTTCTCCTTCATTAGTTGCAGACAACTATTTCGAGCTAGGGCTTCATTTCGAAGCCCTAATTGCAAGCCTCGTTCACCATCGCCGTCAATATATTCTACATGGTTGGATCCTCCGGGTTCGAGCAGAATTGAGTTTGGGTTTCGCGGCAGCCAGAGCAGGACCGTGGTCAAGGCATCGAATTGGACTGATCAAAGATCCCCATATGAAACTCTTGAATTAGGAAGAGACGCTGATGAGGAACAGATAAAGAATGCTTATAGACGTTTGGCCAAATTTTATCACCCAGATGTCTATGATGGCAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCAAGGTTCATAAAGATTCAAGCTGCTTATGAATTACTCATAGATGATGAGAGGCGGAGGCGGTATGATATGGACAACCGAGTAAACCCAATGAAGGCATCTGAGGCATGGATGGAGTGGCTTATGAAAAAGCGAAAGGCTTTTTATCAGCGAGGTGATATGGCTATTGCTGCTTGGGCAGAGCAGCAACAGCGTGAGTTAAATATCCGTGCACGTTCTCTATCTCGTTCAAAGATAGATCCAGAAGAAGAAAGGAAAATCCTGGCAAGAGAAAAGAAAGCTTTTGCTGAAAATTTCAACAATACCCTTAAGAGGCATACACTTGTATTGAAGAAAAGAGATATAATGCGGAAAAAGGCTGAGGAAGAAAGAAAGAAGACTATCGCACGGTTGTTGGCTGCAGAGGGTCTTGAGCTTGATTCAGATAGTGACGAGGCACTGTAG 816 0.4473 MSSLKTLSRPQPLFSFISCRQLFRARASFRSPNCKPRSPSPSIYSTWLDPPGSSRIEFGFRGSQSRTVVKASNWTDQRSPYETLELGRDADEEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDDERRRRYDMDNRVNPMKASEAWMEWLMKKRKAFYQRGDMAIAAWAEQQQRELNIRARSLSRSKIDPEEERKILAREKKAFAENFNNTLKRHTLVLKKRDIMRKKAEEERKKTIARLLAAEGLELDSDSDEAL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0362 271 Gene3D DnaJ domain 66 179 IPR036869 -
Lele03g0362 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Lele03g0362 271 SMART dnaj_3 78 142 IPR001623 -
Lele03g0362 271 CDD DnaJ 80 139 IPR001623 -
Lele03g0362 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Lele03g0362 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Lele03g0362 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Lele03g0362 271 PANTHER CO-CHAPERONE PROTEIN DJLA 68 262 - -
Lele03g0362 271 SUPERFAMILY Chaperone J-domain 73 148 IPR036869 -
Lele03g0362 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Lele03g0362 271 FunFam Chaperone protein dnaJ 65 170 - -
Lele03g0362 271 Pfam DnaJ domain 80 147 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0362 Lele-ChrLele03 2084288 2086302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0362 71 147 C2H2 Transcription Factor Family AT1G74250 36.364 6.67e-06 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0362 03 2084288 2086302 Lele03g0362 03 2084288 2086302 ECH
Lele01g0356 01 2069407 2071425 Lele03g0362 03 2084288 2086302 hybridization
Lele02g0351 02 2019294 2021389 Lele03g0362 03 2084288 2086302 hybridization