Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0358 ATGCGTCCTTCAAGGTCACGTCAAGTTCATCCCACCCCGGTTCAGGGGGGGCGTCTCGACCCTAAAATCTGGCGAGCATGCGCCGGTGGATCCTTTCGAATCGCTCCTCTCCATTCTAGGGTTTATTACTTCCCTCAGGGCCATATCGAGCATGCCTCGTCGGCTCCTCAATACATTAACCCTCTAATCTTTTACAGGCCCCTCATTCCCTGTCGAGTTTCAGCTATTGAATTTCTTGCTGACCCCACCACTGACGAGGTATTTGCCAAGCTTTCGCTCCTTCCTTTGGGCGATGGCAACTCTGATCACTTTGCCGATTCCTTGGAAGCGCCGGACGATGACAAGGTTGTGTCGTTTGCGAAGGTTCTGACGCGTTCTGACGCGAACAATGGCGGTGGATTCTCTGTTCCTAGGGACTGTGCTGACTTCATCTTTCCGCCTCTGAACTTCCAGGGCGACCGACCCATCCAGACATTGTACGTGACGGATGTTCACGGTAAGGTCTGGGAGTTTCGCCACATTTATCGGGGCACACCGAGGCGGCACTTGCTCACTACTGGATGGAGTAAGTTTGTCAATAGCAAGAAGTTGGTTGCTGGTGATTCAGTGGTTTTCATGAAGAATTCTGCAGGGATGTTGTTCGTCGGGATTCGCAGAGCTTTCCGATTTGCTAAATTAACTACCGTCGATTGCTCCCTGTTGTCTTCCCAGCTAGGTGGGGTGAGAAATAAACCTGAGGGGGAGCAGCAGCAAGAGGGCCATTTAGGTTCCACAGGGAAAGAAGGATTTTCAAGGGACGGGAAGGGCAGATTGTCGGCTAAGGAAGTTGCTGATGCTGCAGATTTGGCAGCGCAAAACATGCCGTTTGAGGTTGTTTATTATCCAAGGGTGGGCTGGACGGACTTTGTGGTGAAGGCGGAAGCTGTGGAGAAAGTTTGGAATGTCGCATGGACTGCCGGAATGAGAGTTAAAATGCCAATGGAGACAGAGGATTCGGCCAGGATCACATGGTTTCAGGGCACAGTATCATCTGCATCTGCTCCTGATAATGGGCTTTGGCGGGGTTCTCCATGGCGTATGCTTCAGGTTATGTGGGATGAACCTGAAGTCTTGCATAATGCAAAACGAGTGAGCCCCTGGGAGGTTGAACTTGTTTCCTCTGTTCTTCCCCCTAATACAGTATTCCCTCCTGCAAAAAGGTTTAGAGCTGCTCAGTATTGTGGGGTGGCAACCGATAGGGAGGGTGACCCCTTCTTTACTATGACAGGTTTGACTAATTCAACAATGGGGCACTTGAACCAATCATTGTTGAATCACAGTACTGTTGTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATCTATCTTCTGTATCAAGTCTCTCCAATTTTGAAATTGGTAATTCTCATCTGTATATTGGTAATACATTTGGAAACATGGTACCCAAGATGAAAACTTTTATGTCAACAGAGCCAAATATTGACAGTTCTCAGTCTAATAGCTTGTCACCAGAAAGCCAGAGTAGTTTGCAGGGCTCGGGCACAGAATTTGATGGGACACGAGGCTGCAACTTAACAAAACATGGTGCAAGTTCAATTCAGCTATTCGGAAAGCTTATTCAATTGGAACAGCCCGTTGAAAATGATGAGGGTAGTAATGGCCGCAATGAGACTGAAGGCGTGGACTAA 1686 0.4887 MRPSRSRQVHPTPVQGGRLDPKIWRACAGGSFRIAPLHSRVYYFPQGHIEHASSAPQYINPLIFYRPLIPCRVSAIEFLADPTTDEVFAKLSLLPLGDGNSDHFADSLEAPDDDKVVSFAKVLTRSDANNGGGFSVPRDCADFIFPPLNFQGDRPIQTLYVTDVHGKVWEFRHIYRGTPRRHLLTTGWSKFVNSKKLVAGDSVVFMKNSAGMLFVGIRRAFRFAKLTTVDCSLLSSQLGGVRNKPEGEQQQEGHLGSTGKEGFSRDGKGRLSAKEVADAADLAAQNMPFEVVYYPRVGWTDFVVKAEAVEKVWNVAWTAGMRVKMPMETEDSARITWFQGTVSSASAPDNGLWRGSPWRMLQVMWDEPEVLHNAKRVSPWEVELVSSVLPPNTVFPPAKRFRAAQYCGVATDREGDPFFTMTGLTNSTMGHLNQSLLNHSTVVPAGMQGARQDLSSVSSLSNFEIGNSHLYIGNTFGNMVPKMKTFMSTEPNIDSSQSNSLSPESQSSLQGSGTEFDGTRGCNLTKHGASSIQLFGKLIQLEQPVENDEGSNGRNETEGVD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0358 561 MobiDBLite consensus disorder prediction 240 268 - -
Lele03g0358 561 Gene3D - 317 389 - -
Lele03g0358 561 Pfam Auxin response factor 279 362 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele03g0358 561 MobiDBLite consensus disorder prediction 489 522 - -
Lele03g0358 561 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Lele03g0358 561 SUPERFAMILY DNA-binding pseudobarrel domain 104 226 IPR015300 -
Lele03g0358 561 Gene3D - 116 221 IPR015300 -
Lele03g0358 561 MobiDBLite consensus disorder prediction 240 257 - -
Lele03g0358 561 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Lele03g0358 561 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 547 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele03g0358 561 SMART B3_2 119 221 IPR003340 GO:0003677
Lele03g0358 561 FunFam Auxin response factor 117 221 - -
Lele03g0358 561 CDD B3_DNA 118 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0358 Lele-ChrLele03 2053483 2060125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0358 18 559 B3 DNA Binding Superfamily AT1G77850 47.653 1.78e-165 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele03g0358 B3 8.4e-23 CL0405