Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0354 ATGACTGGGGACCGATGTCACCTGAGGAGGAAGATGAAGGGCAGAGGTGCGCAAGGAGGTTGCGGAACCGAGGACAGGCCTTGCCCGGTTTCGAGGGTTCCGGTTAAATCCCCGAGGACCCAACCTGGAAATTCTGATAACTCCACTGCACTTGAAATTGATTACTACTCGCAGGCTATAAAAGCGCTCAGTGAGCGCTCGCCTTTTGATGTTGCGGAAGAGACTTCTACGTCGACGGTGCCTACACTTCCCAGTGGGTGGGCAAGCTTCTTAAACTGCCATGCTGAAAGTCGTAGGCGCCACAAGAAGTCCCATTCGGGTGCGGACAAGAAATCGTCTAGAGCATGTGAGAAGTCGCGAAGTTCAAGCATATGGGTTGAGACTGAGGATTACTTTAGAGACTTGAAATTGTCAGACATAGACGCCTTGTTGGAGGCATCCTCCTCTTTTAGTTTAGCTACTCGCAAGTGTTTTTCTGTTCCACCAGTTGGAAATGCTCCAAGGTCAAATGCAGCTAGTTACGAGGATTACAAGGAGACTGATGGAAACCTAAATAGCGAGGATGTGAAGAATGAGGACCGTGTCATGGAAAGTAACAGCGTTGCTGCTGGAGTTTTGGCTCAGGATGACAAGGATCATGATGCTTTTGATTCGTCTAGTAGTTTAGAATGGCTTTTAGGACGTAGGAATAAGATTTCTCTGATTCCTGAGCGCCCTTCAAAGAGGAGGAAACTTTTGGGTGGTGAATCTGGGTTGGATAAATTTTTAATGACCAGTCCTTGTGATGGAGACTCTCCTCTGTGTCACTATTGCTGCAGGGGAGACACCTGCAGAGAGTCTAATCAATTAATTGTCTGCGTTATTTGTAAAGTTGCAGTTCATAAGAAGTGCTATGGTGTGCAAGATGATGTAGACGGGTCTTGGTTGTGCTCTTGGTGCAAGCAAAAGGGTGACATTGATGAAATGGTGCATCCTTGCGTGCTTTGTCCAAAGAATGATGGTGCTTTAAAGCCTGTTCACAGACATGAGGAGAGTGCTGGGTCTGCGCAATTTGCTCACTTGTTTTGTTGTTTGTGGATTCCTGAGGTTTATATAGAGGATCTGGAGAAGATGGAGCCTGTTATGAATGTAGGAGGAATCCAGGAAACCCGGAAAAAATTAGTCTGTAATATTTGCAAGGTGAAATTTGGCGCATGTATTCGATGTAGCCATGCATACACTTCAAGTCCTCGTTTAATATCTTATAACTCCTTGCTGCTGGGTGGTGTTACAGGATCCTGCAGGTCTTCTTTCCATCCTTTATGTGCCAGGGAAGCTAGCCACAGGATGGAGGTTTGGGCAAAAAAAGGTCATGACAATATTGAGTTGCGGGCCCTTTGTTCCAAACACTCGGATATGCAGGAGAACAGCACCATCTTGCCTTCAGGTGGCTCTGTAGCTTTTTGTAGTGATTTATCTTTTCCGGCAGGCACACAGCACAATTTGAAAATTGGATGCCAAAATGGAGACAATGTTGGGATAGTTTATGATGGTAGTCCTGATAAATTGAGTCATGGTGAACCACCGGATGAAATGTTGACTGATTGTCAGTTAAATGCTCATGAAACATCAGAATGTAGTGGTTTGCCACAACTAAGTAATACTGCAGTGGTGGGAAGGACTGATGAAATTGCCAATGCATCTGACTCCCTTGGTTTTGCCGTTGTTTTGAAAAAGTTGATAGATCGAGGAAAAGTTGATCTTAAAGATGTAGCTTTGGAGATTGGCATTTCTTCTGATACATTAAACGCAAATATTAATGATTCTTGCATGGCCCCTGATGTGCATCTCAAAATATTCAATTGGCTAAAAGCTCATGTATATACTAATGCGTTTCAGAAAAGTTTGAAAGTCAAATTCAAGCCTGCCAACTTATCCAAGGGTGAAAATGGAATCACTGATTGTTCTGATACTCTACAGATATCGGATTCTGTGTTGCCAGATCCTGTTGCTGGTAAGTCAGTGCCATCAAGGAGAAGAACAACCGGTAATATCAGGATTCGGAAAGATAACAAAGCAATATGTTCATCTGGGGTGGTGTGTAGTGAGAACGGAATGCCAATGGACAAGGCCAAAGGAGGTCAATCCGAACATGAAAATTCTGAAAGATCAAATGAAGCGTCCATTCTTGATGCAACTGAAATGAAACTAACCAAGTCTGAGGACGCTTCTTTTGATTCTCAAGGGAATGCAGATAAACCTGGCAAAATAATCTTATCTGGGGGTGCTTTGGAAGAAAAGCTTGCTAATGCTTTTTCTGATCACCACCATTCTTATTGTTCTGCTGCAGATTTACCTGCTTCGGTTTTCATGAACATTGAAGGAAACTCTTGTTACATTCACCCATACATCCATAAAAAGTTATTGCAGATTCATGCTGGGTTCCTTTCAGAGGATGTTATATGTGAAAGGGAGGAAGAAAATTTTTATTTGGATGGATTCTCAGGGCCTAGTGGTGGCTCTAGTTACCAAAATCCAGAAGTAACTTGCAGTGACATATGTAAGGCTGATAAAGTAAATACGAAGCAATTGGTTATGGCTAGAAATATGGGTTTATTAGAATCTTGTCCAAAAGATGAAGTGGAGGGTGAACTAATATATCTTCAGCATAGATTATTGCAGAATGCAGTTGCAAGGAAGAAGTTTGCTGATAATTTAATCTCTAGTATAGCTAAGAGTCTTCCGCAGGAGATTGATGCTACACACCAGCAAAGATGGGATGCTGTACTTTTTAACCAGTATGTCCGTGATCTTAGGGAAGCAAAAAAGCAGGGCAGAAAAGAGAGAAGGCACAAGGAAGCACAGGCAGTGTTGGTGGCTGCAACTGCAGCAGCATCATCATCATCTAGGGTTTCTTCATTGCGGAAGGATGCCTTTGAAGAATCTGCACTGCCGGAGAATTTTTTAAAGCATGCTTTCAGTCGAAGGACTGGTGTTTGCTCTCAGCCAATGCCACGGGCCAAAGAAACACTTTCAAGAGTAGCTATGGTTAGGACTTCATCAGAAAAACATTCAGATTGTGGTCTACCAGATGCAGATTTTTCTAAGGAGCATCCCAAACTATGTGATATCTGTAGACGATCTGAAACTATGTTGAACCCAATTCTCGTCTGCTCCGGTTGCAAGGTTGCTGTTCACTTGAACTGCTATCGTAGTGTGAAGGAATTTACAGGTCCATGGTACTGTGAATTATGTGAAGATTTATCTTGTAGAATGTCTGGGCAACCTTCTATAAATTCCTGGGAGAAACCTTATTTTGTTGCGGAATGTGGGATATGTGGTGGTACTACTGGTGCTTGCAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTTGAGTCGACTTTCAGAAGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTGTGTTGAAAGGAGTTGACGCATGTTGCATCTGCTGCCGCAAGCATGGTGTATGCTTAAAGTGTAGCTATGGCCATTGTCAGACCACATTTCATCCATCCTGTGCGAGAAGTGCTGGGTTTTACATGAATGTGAGGGCTGCAAGTGGCAAGCTGCAGCACAGGGCTTACTGTGAAAAGCATGGTTCAGAGCAGAAGGCAAAGGCTGAAAGCCAAAAACATGGAATTGAAGAATTAAAAAGTATCAAACAAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTTTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTTGTTATATGTTCACATGACATACTTGCATTCAAAAGAGATCATGTTGCTAGGTCTGTCTTGGGGCATAGCCCTTTCGTTCTTCCTGATTGTAGCTCAGAATCAGCTACAACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCGGATGATGTAACTGTAGACAGCTCAGTTTCTGCTAAGCATCGAGTCCGAGTTGCTGTAACCATGGACAGTGACCCAAAGTTGGATGATGACTGTTCAACTTCACGAAGCCATTATAATCATAAGATTCCTGAGAGGGTGCAGTTTTCTGGCAAGCAGATTCCTCATACAGCTTCCATCATATCACGGAGTATTTCGGATGACAGTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGACATTTGGAAAAGAGTTGGTTATGACGTCAGACGAAGCATCAATGAAGAATTCAATGTTACCTAAAGGATATGCATATGTTCCCGCTGATTGCTTGTCTAATGATAAGCGATGTAAGCAAGATTTATTTACTAGTGAACCAGCGGAGCACAACGGTATCCGGACATTTGAGGAGAATGGCAAAATGGATCTGGAGATCAGCGACAGGGCTCCGCCCGGCACGAAGTTGTGCTCTGCTCTGGAGGGGAAAGTTAACATTGCTGTACATTCGTTATGA 4449 0.4325 MTGDRCHLRRKMKGRGAQGGCGTEDRPCPVSRVPVKSPRTQPGNSDNSTALEIDYYSQAIKALSERSPFDVAEETSTSTVPTLPSGWASFLNCHAESRRRHKKSHSGADKKSSRACEKSRSSSIWVETEDYFRDLKLSDIDALLEASSSFSLATRKCFSVPPVGNAPRSNAASYEDYKETDGNLNSEDVKNEDRVMESNSVAAGVLAQDDKDHDAFDSSSSLEWLLGRRNKISLIPERPSKRRKLLGGESGLDKFLMTSPCDGDSPLCHYCCRGDTCRESNQLIVCVICKVAVHKKCYGVQDDVDGSWLCSWCKQKGDIDEMVHPCVLCPKNDGALKPVHRHEESAGSAQFAHLFCCLWIPEVYIEDLEKMEPVMNVGGIQETRKKLVCNICKVKFGACIRCSHAYTSSPRLISYNSLLLGGVTGSCRSSFHPLCAREASHRMEVWAKKGHDNIELRALCSKHSDMQENSTILPSGGSVAFCSDLSFPAGTQHNLKIGCQNGDNVGIVYDGSPDKLSHGEPPDEMLTDCQLNAHETSECSGLPQLSNTAVVGRTDEIANASDSLGFAVVLKKLIDRGKVDLKDVALEIGISSDTLNANINDSCMAPDVHLKIFNWLKAHVYTNAFQKSLKVKFKPANLSKGENGITDCSDTLQISDSVLPDPVAGKSVPSRRRTTGNIRIRKDNKAICSSGVVCSENGMPMDKAKGGQSEHENSERSNEASILDATEMKLTKSEDASFDSQGNADKPGKIILSGGALEEKLANAFSDHHHSYCSAADLPASVFMNIEGNSCYIHPYIHKKLLQIHAGFLSEDVICEREEENFYLDGFSGPSGGSSYQNPEVTCSDICKADKVNTKQLVMARNMGLLESCPKDEVEGELIYLQHRLLQNAVARKKFADNLISSIAKSLPQEIDATHQQRWDAVLFNQYVRDLREAKKQGRKERRHKEAQAVLVAATAAASSSSRVSSLRKDAFEESALPENFLKHAFSRRTGVCSQPMPRAKETLSRVAMVRTSSEKHSDCGLPDADFSKEHPKLCDICRRSETMLNPILVCSGCKVAVHLNCYRSVKEFTGPWYCELCEDLSCRMSGQPSINSWEKPYFVAECGICGGTTGACRKSSDGHWVHAFCAEWVFESTFRRGQVNAVEGMETVLKGVDACCICCRKHGVCLKCSYGHCQTTFHPSCARSAGFYMNVRAASGKLQHRAYCEKHGSEQKAKAESQKHGIEELKSIKQIRVELERLRLLCERIVKREKIKREFVICSHDILAFKRDHVARSVLGHSPFVLPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKHRVRVAVTMDSDPKLDDDCSTSRSHYNHKIPERVQFSGKQIPHTASIISRSISDDSGWRSKSRKHQETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDKRCKQDLFTSEPAEHNGIRTFEENGKMDLEISDRAPPGTKLCSALEGKVNIAVHSL 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0354 1482 SUPERFAMILY FYVE/PHD zinc finger 259 315 IPR011011 -
Lele03g0354 1482 Coils Coil 1229 1249 - -
Lele03g0354 1482 MobiDBLite consensus disorder prediction 1 50 - -
Lele03g0354 1482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1100 1211 IPR013083 -
Lele03g0354 1482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 466 IPR013083 -
Lele03g0354 1482 MobiDBLite consensus disorder prediction 699 719 - -
Lele03g0354 1482 ProSiteProfiles Zinc finger PHD-type profile. 265 316 IPR019787 -
Lele03g0354 1482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 322 IPR013083 -
Lele03g0354 1482 SUPERFAMILY FYVE/PHD zinc finger 1025 1082 IPR011011 -
Lele03g0354 1482 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1024 1082 IPR013083 -
Lele03g0354 1482 ProSiteProfiles Extended PHD (ePHD) domain profile. 1100 1209 IPR034732 -
Lele03g0354 1482 Pfam PHD-finger 1046 1079 - -
Lele03g0354 1482 Pfam PHD-finger 281 314 - -
Lele03g0354 1482 ProSiteProfiles Zinc finger PHD-type profile. 1032 1081 IPR019787 -
Lele03g0354 1482 CDD ePHD 1103 1208 - -
Lele03g0354 1482 Coils Coil 928 948 - -
Lele03g0354 1482 MobiDBLite consensus disorder prediction 168 193 - -
Lele03g0354 1482 ProSiteProfiles Extended PHD (ePHD) domain profile. 323 464 IPR034732 -
Lele03g0354 1482 SMART PHD_3 267 314 IPR001965 -
Lele03g0354 1482 SMART PHD_3 1156 1209 IPR001965 -
Lele03g0354 1482 SMART PHD_3 388 464 IPR001965 -
Lele03g0354 1482 SMART PHD_3 1034 1079 IPR001965 -
Lele03g0354 1482 ProSitePatterns Zinc finger PHD-type signature. 1035 1078 IPR019786 -
Lele03g0354 1482 PANTHER PHD FINGER PROTEINS 92 971 - -
Lele03g0354 1482 Pfam PHD-zinc-finger like domain 1102 1208 - -
Lele03g0354 1482 Pfam PHD-zinc-finger like domain 325 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0354 Lele-ChrLele03 2011836 2023813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0354 262 468 C2H2 Transcription Factor Family AT3G14740 27.619 3.66e-13 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0354 03 2011836 2023813 Lele03g0354 03 2011836 2023813 ECH
Lele02g0341 02 1959432 1970369 Lele03g0354 03 2011836 2023813 hybridization