Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0351 ATGCATCACCTACCTCGATTTTTAGGCCATAGAAAGCAAGCTAAGGGCATGGACCACAAGAAGATCCCAAGAAAACCGAAGCTCGAGCGCCGTAATGCCGCTAAATACTTTGAGTATGATGCTGCGTCATCTTCATCGTCGCTGGACGACTCCTCTGGTTCCCTATATACTCGATCAATGGAGTTTTATGACGGAACCAGCTTCCGAATTGAGGGAGTTGAGGGCGAGTTTGATCTTATATGCAGGAGTTTGGGGCTATCCGGACCAGAAGATTTCGCTATCCCGGCGGCGGCGTGGGAGGCTATGAAGGTTAGGTCGTCTTCGGATATTCTTCCAAGGTTGAAGTTGAAAGATTTGGAAAGTCGGGAGAAGGAAGAGCTGAAAGATAAAGAGTCGAATCAATTAGTGCGTGAATCCGGTGACAATTGTGAAGAAAGGGTTACGATTAGAGATGTGAATGAATCAGCTAAAGACGACCCTGCTGAGACTAGTGGGAGCGGAGGTATCAAGGGTCTCCGTCCGCCGATGATTAGGCCGCCGCCAGGGATGAGGCTTCCAGTTAATGATGACATGTGTTCTACCTGGGATATTCTGAGAGGTCTTGCTCCTCAAGGTGAAGGACAGTCATTGGAAAAGTACGAGGAGCCGAACTTTTCTGATGATGACCAAGAACGACGGAGAGAAACGGAGAGAGCAGAAGCGCAGAAACAAGAAGAAGCAGGAGTACGTGAGGCGGACGGGTTTAATCCGAAGTTAGAAGAGGATAATACATCAAGGCTTGCGGATGTTGTTGCTGAGTTTTCGGGATCGTGTTCGTTTACTACGTCAAACGAAGATGATACTTCTAGCTCCTCCACGGGTCCAAGGTCTACCAATATATCCCCTAATGTGAGATTTAGACGAATTATTGCAAACTGGCAAAAGGGGGAGCTTTTGGGACGTGGTTCGTTTGGGTCAGTCTACGAAGGAATTTCTGGAGATGGATTCTTTTTTGCTGTGAAAGAAGTCTCACTGCTCGATCAAGGGAGTCAGGGACAGCAGAGTGTCTTTCAACTGGAGCAGGAGATTGCTCTTTTGAGTCAGTTTGAACATGAGAACATTGTTCAATACTATGGCACAGAAACGGATGAATCAAAGCTGTACATCTTTCTTGAGCTTGTTACTAAAGGTTCCCTTGCAAGCCTCTACAGGAGGTACAATCTTCGAGACTCTCAAGTGTCTGCCTACACAAGGCAGATTCTGCATGGTTTAAAGTATCTTCATGACCAAAATGTGATTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTAGCGGATTTTGGATTGGCAAAGGCAACCAAATTCAACGATGTTAAATCATGCAAGGGAACAGCATTTTGGATGGCGCCTGAGGTTGTAAAAGGTAAGAATCAAGGTTATGGGCTTCCAGCTGATATATGGAGTCTTGGTTGCACTGTATTGGAGATGTTAACCGGCCAAATTCCATACTCTCATCTTGAGGGGATGCAAGCATTGTATAGAATTGGAAAAGGTGAGCGCCCGCCTGTTCCTGATTCTCTTTCAAAAGATGCAAGGGATTTTATACTGCAGTGTCTTCAAGTCAATCCAGACGAGCTCAACTCCAACTATGAAACACATCAAGTTGGTCTTGGATCCACTATTGCTGCGACTGTTGTGCGTTTGTGA 1710 0.4579 MHHLPRFLGHRKQAKGMDHKKIPRKPKLERRNAAKYFEYDAASSSSSLDDSSGSLYTRSMEFYDGTSFRIEGVEGEFDLICRSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLKDLESREKEELKDKESNQLVRESGDNCEERVTIRDVNESAKDDPAETSGSGGIKGLRPPMIRPPPGMRLPVNDDMCSTWDILRGLAPQGEGQSLEKYEEPNFSDDDQERRRETERAEAQKQEEAGVREADGFNPKLEEDNTSRLADVVAEFSGSCSFTTSNEDDTSSSSTGPRSTNISPNVRFRRIIANWQKGELLGRGSFGSVYEGISGDGFFFAVKEVSLLDQGSQGQQSVFQLEQEIALLSQFEHENIVQYYGTETDESKLYIFLELVTKGSLASLYRRYNLRDSQVSAYTRQILHGLKYLHDQNVIHRDIKCANILVDASGSVKLADFGLAKATKFNDVKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGQIPYSHLEGMQALYRIGKGERPPVPDSLSKDARDFILQCLQVNPDELNSNYETHQVGLGSTIAATVVRL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0351 569 ProSiteProfiles Protein kinase domain profile. 306 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0351 569 MobiDBLite consensus disorder prediction 204 257 - -
Lele03g0351 569 Gene3D Transferase(Phosphotransferase) domain 1 388 554 - -
Lele03g0351 569 MobiDBLite consensus disorder prediction 213 257 - -
Lele03g0351 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Lele03g0351 569 MobiDBLite consensus disorder prediction 123 158 - -
Lele03g0351 569 SUPERFAMILY Protein kinase-like (PK-like) 280 546 IPR011009 -
Lele03g0351 569 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 67 546 - -
Lele03g0351 569 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Lele03g0351 569 FunFam Mitogen-activated protein kinase 1, putative, expressed 304 556 - -
Lele03g0351 569 MobiDBLite consensus disorder prediction 271 293 - -
Lele03g0351 569 Pfam Protein kinase domain 307 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0351 569 SMART serkin_6 306 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0351 569 Gene3D Phosphorylase Kinase; domain 1 288 387 - -
Lele03g0351 569 MobiDBLite consensus disorder prediction 123 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0351 Lele-ChrLele03 1989201 1995193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0351 6 546 MAP Kinase Kinase Kinase AT4G08500 50.667 3.40e-166 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele03g0351 Pkinase 4.9e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0351 03 1989201 1995193 Lele03g0351 03 1989201 1995193 ECH
Lele01g0343 01 1995217 2001278 Lele03g0351 03 1989201 1995193 hybridization
Lele02g0338 02 1930713 1936536 Lele03g0351 03 1989201 1995193 hybridization