Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0345 ATGAGCAAACCCAGAACCCAAAGGAAAGACTCCAAACATGTCAACCGAAACCATAATCAGAAAACAGAGAAACAAGCCCCTTGGGCAGCGATAAGAGGCCTATTGCCCTGTAGAACTGTCCAAATTCAGCAGCCGCCGCAGTCGGAAGTGAAACAACCGAAGCAGAAACAAGAGCTAAGGAAGCTACAAGAAGAAGCAGCAGCAGCCCCAGACGAAAGCAGAAAGAAGTGCAAGAAAATGAGATGTTCTGCTTCACTTTGTAACAACACCAAGATCGTGGCAAGGCCTGAAACAGTGACTCCTGATATCAACAAGGTCAAAAGGGCGTCTCAGCTGGATGCATGTAACACGGCCAACAGTGATTCTTCTCATTCTAACAGATCCTTGAAAGCTCCTCTGCTTGAACTGAATGGTGTGGTTGCGTCTGCTTCTTCTTCTAACTCTCTATCTGTATCTTCAAACTCTTCTGTGAGTGGGTCTTTTAGGGGAATGCCGTTCAGGAGGTTCTCTGGTTGCTATGAGTGTCGAATGGTGGTTGACCCTCTTCTTCCTTTCACCAGAGACCCTTCACTCAGGAGTAGCATTTACCCTTGCCCTCACTGTGGTGAGATCTTCATGAAACCTGAAAATTTAGAGCTTCATCAGGCTGTTAAACATGCTGTATCTGAACTGGGTCCAGAAGATACGAGCAAGAACATAGTGGAAATTATATTCCACTCAAGCTGGCTAAAGAAACAATCTCCAGTCTGCAAAATAGACCGCATCCTTAAAGTCCACAACACTCAGAGGACAATTACCAAATTCGAAGAGTACAGAGAATCCATCAAAGCCAAAGCCATGAAGCTTCCAAAGAAGCACCCTCGTTGCATAGCAGATGGGAACGAGCTACTGAGGTTCCATTGCACGACCTGTTTGTGCTCACTGGGCCTAAAAGGCTCCACTAACCTCTGTAACTCAATACCACAGTGCCGCGTTTGTGGCATAATCAAGAATGGGTTCAAGGTGGTCGCCGGAGGTGGAAAAGAGATATTGACGACGGCGACAAGTGGGAAAGCACACGACAAAGCCGAGGTTTCAGGCGACGAGAATAATGAGAAGAGAGCAATGCTGGTATGCAGGGTGATAGCAGGGAGGGTAAAGAAGAATATAGAAGGAGGAGGAATAATGAGTACGGAAGAATATGATTCTTTTGCAGGAGAAGTTGGAGCTTATTCCAATTTGGAAGAGTTGTATGTGACCAATCCTAGAGCTATTTTGCCCTGCTTCGTTGTTTTTTACTCTGGTTTTTGA 1290 0.4581 MSKPRTQRKDSKHVNRNHNQKTEKQAPWAAIRGLLPCRTVQIQQPPQSEVKQPKQKQELRKLQEEAAAAPDESRKKCKKMRCSASLCNNTKIVARPETVTPDINKVKRASQLDACNTANSDSSHSNRSLKAPLLELNGVVASASSSNSLSVSSNSSVSGSFRGMPFRRFSGCYECRMVVDPLLPFTRDPSLRSSIYPCPHCGEIFMKPENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQRTITKFEEYRESIKAKAMKLPKKHPRCIADGNELLRFHCTTCLCSLGLKGSTNLCNSIPQCRVCGIIKNGFKVVAGGGKEILTTATSGKAHDKAEVSGDENNEKRAMLVCRVIAGRVKKNIEGGGIMSTEEYDSFAGEVGAYSNLEELYVTNPRAILPCFVVFYSGF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0345 429 ProSiteProfiles Zinc finger C2H2 type domain profile. 196 224 IPR013087 -
Lele03g0345 429 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 79 426 - -
Lele03g0345 429 MobiDBLite consensus disorder prediction 1 28 - -
Lele03g0345 429 Gene3D - 220 427 - -
Lele03g0345 429 SUPERFAMILY ADP-ribosylation 221 428 - -
Lele03g0345 429 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Lele03g0345 429 SMART c2h2final6 196 219 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0345 Lele-ChrLele03 1946536 1947943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0345 161 426 C2H2 Transcription Factor Family AT1G75710 53.741 1.22e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele03g0345 None None None