Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0335 ATGACGAGCTTCCACGGCTCAAGCTCCGCTCTCACCTTGATGCCCGTGGCCATGGCTATGGACTTCGTCCATGAACTTGAATTCTCCGGCTCCAGCACCACCACCACACCTGACGACGACGATTATGCCGCAGCTTGCCATTGGAACCACTGGTCCCCCCTCGTCAACTGGGAAGCCTTCTCCGGCGCCCAAGACGACTTCCACGGCCTCATAGACTCCATGATGGATGACTCTGCCGGGATCATCAGCACCCAACACGGAACGGAAGAAGTTTACAACTCGCCCAACTCCACTTCGACGGAAGTAACCGTGGTTGACGAAGAAGCAAGCGACGGTGTTGAGGATTTCAAGGGTCTCAGGCTGGTGCACCTTCTAATGGCAGCCGCCGAAGCCCTCGCCGACGCCAATAAGAGTCATGATCTGGCTCGAGTGATATTGATTCGCCTCAAGGAGTTGGTTTCCCCCATCGACGGCTCCAACATGGAGAGGTTGGCGGCGTATTTTACGGAAGCCTTACAGGGTTTGCTCGAAGGCGCAGGGGGCGCACAGAACAACAACCACCACAAGAATTTCACCGGCAATGGACCCCACCGTGAGGACCACCCTCCATTGGATGTGCTGGCCGCCTTCCAGCTCCTTCAGGACATGTCCCCTTACGTCAAGTTCGGGCACTTCACCGCAAACCAGGCCATCCTGGAGGCCGTGGCCACCGAGAGGCGAGTCCACATCATCGACTACGACATCATGGAAGGCATCCAGTGGGCATCCTTAATTCAGGCCCTCGCCACTAGAACGGACGGCCTACTCGGCCCACACCTCAGGATCACGGCATTGTCCAGAAGCGGAGGCGGAAGAAGATCGATCATCACCGTGCAAGAGACGGGGCGTCGTTTGACGGCGTTCGCGGCTTCCGTTGGTCAGCCGTTCTCGTTTCATCAATGCAGGTTGGACTCGGACGAAACATTTCGACCTTCGGGTCTGAAGCTGGTTCGAGGAGAGGCCCTGGTGTTCAACTGCATGCTGCATCTCCCCCACCTCACTCACCGGGCACCCGAGTCGGTGGCATCGTTCCTGAACGGAGCGAAGACGTTGAATCCGAGACTAGTGACATTGGTTGAGGAGGAAAGCGGACTCTTCAGCGGAGAAGGGGGGTTTGTGAGTCGATTCATGGACTGTTTGCACCATTACTCTTCGCTTTACGATTCGCTGGAGGCGGGGATACCCATGCAAAGCGGGGCGAGGGCGTTGGTGGAGCGGGTGTATTTGGGGCCCCGAATAGCGGGGTCGGTGGCGAGAACATACAGAAACGGGGGCGAAGAGGAGAGAGCTGGGCCGTGGGGGGAGTGCTTGGGGGAGATGGGGTACAAGGGAGTGGCCATAAGCTTCGCCAACCAATGCCAAGCCAATCTCTTATTGGGACTCTTCAACGATGGCTATAAGGCAGAGGTGTTGGGTTGCAATAAGTTGGTGTTGAGTTGGAGATCTAGGCGTTTCCTTTCCGCCTCTCTTTGGACATCTTCTTCCCCGATCGCTCCTTTTCAATCATTGTTCTAG 1554 0.5682 MTSFHGSSSALTLMPVAMAMDFVHELEFSGSSTTTTPDDDDYAAACHWNHWSPLVNWEAFSGAQDDFHGLIDSMMDDSAGIISTQHGTEEVYNSPNSTSTEVTVVDEEASDGVEDFKGLRLVHLLMAAAEALADANKSHDLARVILIRLKELVSPIDGSNMERLAAYFTEALQGLLEGAGGAQNNNHHKNFTGNGPHREDHPPLDVLAAFQLLQDMSPYVKFGHFTANQAILEAVATERRVHIIDYDIMEGIQWASLIQALATRTDGLLGPHLRITALSRSGGGRRSIITVQETGRRLTAFAASVGQPFSFHQCRLDSDETFRPSGLKLVRGEALVFNCMLHLPHLTHRAPESVASFLNGAKTLNPRLVTLVEEESGLFSGEGGFVSRFMDCLHHYSSLYDSLEAGIPMQSGARALVERVYLGPRIAGSVARTYRNGGEEERAGPWGECLGEMGYKGVAISFANQCQANLLLGLFNDGYKAEVLGCNKLVLSWRSRRFLSASLWTSSSPIAPFQSLF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0335 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 96 495 IPR005202 -
Lele03g0335 517 Pfam GRAS domain family 121 505 IPR005202 -
Lele03g0335 517 ProSiteProfiles GRAS family profile. 112 505 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0335 Lele-ChrLele03 1876102 1877655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0335 93 506 GRAS Transcription Factor Family AT5G41920 34.368 2.76e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele03g0335 GRAS 6.1e-97 CL0063