Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0331 ATGTTGTGCCTTTGGGCCTTTGAAAGAGTCTCCACAACTTCAGATCATCAGATTGTGACTGAATTCAGTCGAACAGAAGCGTATATAGAAACAGAAACATTAAAACAGGGAGATGGCGAATTGTATATGGATAATGATATGGTTGTTGAGGATATCCGTGCAGTGCAGCGATACAGGGAGAGTAGAGGGCACAAGATCCACACTGAGAAATCATCAAAGGCAATGCAATCTCAATCTTCGTCGTCAGCATCATCAAATGGGAAAAAGAAGTTCAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTTTCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTGGGATCTTATTCAACCCCAGAAGCTGCAGCTCGAGCCTACGATGCTGCACTTTTATGCCTGAAGGGTTCTTCAGCTAATCTCAACTTCCCTTCAATTTCTTCACACTATGTTCCTCAAGATACAGCCATGTCTCCTAAATCAATCCAAAGAGTTGCTGCAGCGGCTGCTAATAGCTTTTCAGACAATGCCACAAGCCCAGCTACAGCTTCTGCCTCTGCATCAACCTCATCGTCCCCTTCATTAATGTCGTCTGATCAAATCGATGATGATGTCTCATTAATCTCGTCATTTGGTGGCTACAGTACTAGTTGTGATCAGAGTAATGAACCAGTCTCTTTGATGGAGGACTCTTATTGGTATAGCTTTGATGATTTACAATCGCCAAAGTATGTAAATCAAATGCTCGGTGGTAATTTGTTTGATATTGATCCAACCCAGCTGCTGGAGGACGATTTTCGCGAAGAAAGTGATATTCGTTTGTGGAGCTTCTGCTGA 846 0.4303 MLCLWAFERVSTTSDHQIVTEFSRTEAYIETETLKQGDGELYMDNDMVVEDIRAVQRYRESRGHKIHTEKSSKAMQSQSSSSASSNGKKKFKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSISSHYVPQDTAMSPKSIQRVAAAAANSFSDNATSPATASASASTSSSPSLMSSDQIDDDVSLISSFGGYSTSCDQSNEPVSLMEDSYWYSFDDLQSPKYVNQMLGGNLFDIDPTQLLEDDFREESDIRLWSFC 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0331 281 Pfam AP2 domain 90 139 IPR001471 GO:0003700|GO:0006355
Lele03g0331 281 Gene3D AP2/ERF domain 89 148 IPR036955 GO:0003700|GO:0006355
Lele03g0331 281 ProSiteProfiles AP2/ERF domain profile. 90 147 IPR001471 GO:0003700|GO:0006355
Lele03g0331 281 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 72 222 - -
Lele03g0331 281 SUPERFAMILY DNA-binding domain 90 147 IPR016177 GO:0003677
Lele03g0331 281 FunFam ethylene-responsive transcription factor ERF014-like 89 149 - -
Lele03g0331 281 PRINTS Ethylene responsive element binding protein signature 113 129 IPR001471 GO:0003700|GO:0006355
Lele03g0331 281 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Lele03g0331 281 SMART rav1_2 90 153 IPR001471 GO:0003700|GO:0006355
Lele03g0331 281 MobiDBLite consensus disorder prediction 178 202 - -
Lele03g0331 281 MobiDBLite consensus disorder prediction 61 92 - -
Lele03g0331 281 CDD AP2 89 147 IPR001471 GO:0003700|GO:0006355
Lele03g0331 281 MobiDBLite consensus disorder prediction 72 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0331 Lele-ChrLele03 1853155 1858339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0331 91 280 AP2-EREBP Transcription Factor Family AT1G21910 52.941 3.69e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele03g0331 AP2 1.1e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0331 03 1853155 1858339 Lele03g0331 03 1853155 1858339 ECH
Lele01g0323 01 1856669 1857355 Lele03g0331 03 1853155 1858339 hybridization
Lele02g0318 02 1793370 1794026 Lele03g0331 03 1853155 1858339 hybridization