Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0322 ATGGACGGCTCCGCAATGGAGCTTAGTCCAAACAATCCGGGCACACCTACGCGCCGGAATGCTCGCCGGACGATGGTTCAGTCGACCTTGTTCCCTCAGAAAACTCAAGAGTCCGATGACAGAGCTGATGATCAACAAGTGGAAGAAGAGTCACACTGTTGTGCGAATGAGAACAGGAAGGGAAAGTCCAAACTTAAAGTCACTCCTCGAACCAAGAATTCCAAGCAAAAGGAGAAGCAGCTGCATAATACTATGCCAGAGAATATGGGCACACCCAAGCGCCGGAATAATGAGAAGGGAAATTCCAATCGAAAAGTTACTCCCCGGTCGAAGAATTCCAAGCAAAAGGAGAGGCAGCTGCAGAATACCACGGCAAAGAAACGGTCACCCAAAGGGGTTAAGGGGGCAAGTTCACGGAAAATGTTGACCAATGTGGCACAGATTAATATGACGGTCCCTGATTTGCGTTTGGAGGCAAAATTGTCCGCTGAGGAAAATTCAAGGACTTTTGCTGGACGGCAAATACATCCCTTTTTTTCTTCATGGAAGGTTGGGAAGAAACCTCAGGATGCAGCTGAATCTAATCGCAGTTTATGCGCAGCAAGGAGGAAGGATGAGGAAGTACTTGCTTGTGCCCCTATTCATGTATTTGAAAATAATCAGGATGTCGATGATACATCGTTGCCAGACTGGAAAAACTGGACGTTTTCGGGGCAGACTGCCAAAGCAAATTGTGGTCCAGAGAGTTCATTTTCCTCTGTTTTTGAGGGTTCTATTGAACCCTTGAATATTGATAAGCTTATGGGTACTTTTTATTCCTCTGGTGTTACAGTATCTCAAAATGCCCTATCTTGTTCAGATCAACATTCTATAGAATCTGCACAGCCTCAAGTAGAAAACTCAGCTGCACCTGCTGGCAGGCAAACAAGTCTTCGATCACCAGAAGCGAAACTGGACATGAAAGCCAATACTGCGCAAGCTGGTATTTTCAGAAAGTCAGATCCTGAACCACCAAGTAGATTTCTTCAAGAAAGCATGAGGTCGTATTACCATAGTGGTGGATATAAGGCTGAGGGAACCTCATGGACATACAAGTACAAGCCAACAAAGGCATTTGAGGTATGCGGTAATGACGAGTCTGTGAAATTTTTGCGTGATTGGTTACAACTCTGGCATGGAAGACGTTATCAAAGCAGGAAGGATGCCTTGTACAGGGATAAAGGTGATATGCAAGATGATGACGATGATGATTATGACTGTTCTCATTCTGACTATGATTCAGAAGACATGACCGAGGAGGACTCCCTGGAGAATGTTCTCTTAATTACTGGACCAACTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCACAAGAGGAGGGGTTTGAGGTTCTAGAGCTCAATGCATCAGACTATCGAAATGGGACTACTGTCAGGCAGCACTTTGGAGATGCTTTGGGATCACTTGGGTTCAAAAGGTTATTGGAACACACCAATAGTTCACCAATGAAGAAAAAGAGGAAGTTATCCTCAGGCCTGGCTTTGCCTAGTAACAAAGCATCTGATGAGTTAAATGGAGAGGTAACTGGACCAATAGTCATATCTGGTGATGCTGTCTGCCCTGATGCAACATCTTGGATGTTACCTGGCCAGAGAAATTTAATTGGATATGATAAAGCCCAAAAATTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCTGAGACAGCCAAGGGGCCAATTATATTAACCTGCAATAGCAATAATCCTGCTCTGCCAAATAATTTGAAAAGACTACATGTTTCTTTCGCATTGCCATCCACAAAGGAGTTGCTGTCCCACTTGTACATGGTTTGCATCACAGAAGGAGTCGACATTCATCCTCTTATACTGGAGAAATTTATACAATCTTGTGATGGTGATATCCGCAAAACCATGATGCATCTTCAGTTCTGGTTCCAGGGTAAAACAATAAGAAAAGATAGAAAAGCACAGCAATTGTATGGCTCTCTTCCATTTGACCTTGACGTTGGCCATCAGATACTGCCCAAGATGATGCCCTGGGATTTTCCCTCTCAGTTATCTGAACTAATTGAGAGTGAAGTTACCAAGGTAATCACCACAATGGAAGGAAACTCTAGTTTGCAGGGGTTAGTTGCAGAACAGCTTGACATAAATGAAAAGCAAAGCGATTCAGATGTGCAGCAGATGGGAACTGATTATATAGAGGCCAAGAAAGTAGAAATGCTTGAGAGGAATGGATCTGTTACTGACTACAGCAAATTGGAGGCTCAATTTCATGCTCTTTCTGAGATTTCAAATTCTTCTTGCACCCCAGTTGCACCTTCCAATCGAAAGATTCAAAGGAAGCTTGTAATGATGTCCTCTGGTTCTGAGGATGGGGATTTAAATAATGGGCATCCTCTAGACATGTGTGATGATGCTAACAATGGACCATCTCTTGAGGACAACAGTGATTCTCCATCTAAATTTCCAATGAATAATAAATACACTAGCACATCATTTCTTAAACCAGGTACCGGATTGGAGGAGTCTGAGGTGGACCTGAGTAAACATTTAGGAACAGCTGATGGTATTTGTTTAAATGAAACATCCAGGTCTTTTGATGTATCCTGTGTTCCAGAATCAACTTTCGTTCCTGAGACTGTTAATGAATTACAGACTATCTCTGGAGCAGTGTCTTGTGGCAATCTTGCTGGTCCTGTGGAAGTCTCGGTGAATAACGAGTCACTACCATTCACTTTCAGTGTTTGTAAGCGCTTAGCCAAGCGAGCACTAGATGATGATTTGTTCGGAAGTATCAAAATACCAGAATCTTCTCAAAAAGAGATCGTGCAAGATTTAATTGATGAAAATATGGAAACTACACCTGTGTATAACGTGATGGACGAATGCAGTCGAGTGGATTTCAAAATGAAGTCCAATTTTGTTGAACCCTTTCCATCAATGGGGACTGATGTTATACATAACCTGTGGAGAGAACTTCGTGAATGTCGAACAGATTTAAGACAGCATGCTGCCACTGAACAACCAGGTGCTTTTCAAGTTGTTAAACTAGCTTGTGGTATGAGCAATCTAATATCAGAGGCTGACTTGCTGTTCGGTAACTACCAACAAAAAGATTGTGATATTTTGGAAGCTCCAACTTCACTTGTTAATGAAGGCACATTTAATTGGTATGATGAGCAAATGATGGCGTCCACTGTTGCTGAACATGGGTTTTGTTTTTACGCTAATCACTTGTCAGATATGAGATTGAAGTCAGGCTGCGAGAACTGTGTAGATTTAACTTCGGAGATGTTGGCTTCCACTACTAACAAAATTGCCCTGGGCTATTTATCTGGACAGGGCCTCACAAACCGTACTAACCCCAGTACTGGAAAGGACTTAGAGAACAGGTCAAGAAATGATTTGCCAGACAGCCAAATGCAGACATCACTGTTCAATGTAGTCCGGTCCACGGTACCTGCAAGCTTATCCTTAGCACTGAAAGGCGTTGCATTCAATGAATATCTATCTTCATTGCGCCTCATTGCAGGGTCAGAAGATTTCCGCATATCACAGGGTGCTGAAAGGACTAGAAGGCGAAGGGTGCGGGGTGCTCAAGCTCAACATTACTGGAGCGAGGGTACTATGCCGTTATCGCGTGAAGATATATCATTGTTGTGTGAAGGAGATCTGTACAGAAAGATTTTTTCCAAGTATATTGATGCCAGCAACAAGGTGGATGGCAACTTTACACAATTCAACACCTGGGCATAG 3825 0.4306 MDGSAMELSPNNPGTPTRRNARRTMVQSTLFPQKTQESDDRADDQQVEEESHCCANENRKGKSKLKVTPRTKNSKQKEKQLHNTMPENMGTPKRRNNEKGNSNRKVTPRSKNSKQKERQLQNTTAKKRSPKGVKGASSRKMLTNVAQINMTVPDLRLEAKLSAEENSRTFAGRQIHPFFSSWKVGKKPQDAAESNRSLCAARRKDEEVLACAPIHVFENNQDVDDTSLPDWKNWTFSGQTAKANCGPESSFSSVFEGSIEPLNIDKLMGTFYSSGVTVSQNALSCSDQHSIESAQPQVENSAAPAGRQTSLRSPEAKLDMKANTAQAGIFRKSDPEPPSRFLQESMRSYYHSGGYKAEGTSWTYKYKPTKAFEVCGNDESVKFLRDWLQLWHGRRYQSRKDALYRDKGDMQDDDDDDYDCSHSDYDSEDMTEEDSLENVLLITGPTGSGKSAAVYACAQEEGFEVLELNASDYRNGTTVRQHFGDALGSLGFKRLLEHTNSSPMKKKRKLSSGLALPSNKASDELNGEVTGPIVISGDAVCPDATSWMLPGQRNLIGYDKAQKLILVEDVDILFPEDRGCIAAIQQIAETAKGPIILTCNSNNPALPNNLKRLHVSFALPSTKELLSHLYMVCITEGVDIHPLILEKFIQSCDGDIRKTMMHLQFWFQGKTIRKDRKAQQLYGSLPFDLDVGHQILPKMMPWDFPSQLSELIESEVTKVITTMEGNSSLQGLVAEQLDINEKQSDSDVQQMGTDYIEAKKVEMLERNGSVTDYSKLEAQFHALSEISNSSCTPVAPSNRKIQRKLVMMSSGSEDGDLNNGHPLDMCDDANNGPSLEDNSDSPSKFPMNNKYTSTSFLKPGTGLEESEVDLSKHLGTADGICLNETSRSFDVSCVPESTFVPETVNELQTISGAVSCGNLAGPVEVSVNNESLPFTFSVCKRLAKRALDDDLFGSIKIPESSQKEIVQDLIDENMETTPVYNVMDECSRVDFKMKSNFVEPFPSMGTDVIHNLWRELRECRTDLRQHAATEQPGAFQVVKLACGMSNLISEADLLFGNYQQKDCDILEAPTSLVNEGTFNWYDEQMMASTVAEHGFCFYANHLSDMRLKSGCENCVDLTSEMLASTTNKIALGYLSGQGLTNRTNPSTGKDLENRSRNDLPDSQMQTSLFNVVRSTVPASLSLALKGVAFNEYLSSLRLIAGSEDFRISQGAERTRRRRVRGAQAQHYWSEGTMPLSREDISLLCEGDLYRKIFSKYIDASNKVDGNFTQFNTWA 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0322 1274 MobiDBLite consensus disorder prediction 1140 1160 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 288 308 - -
Lele03g0322 1274 Gene3D - 360 618 IPR027417 -
Lele03g0322 1274 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 10 1252 IPR004582 GO:0006281
Lele03g0322 1274 MobiDBLite consensus disorder prediction 410 434 - -
Lele03g0322 1274 CDD AAA 440 501 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 406 434 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 36 64 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 832 846 - -
Lele03g0322 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 670 IPR027417 -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 288 317 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 92 124 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 810 846 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 1 139 - -
Lele03g0322 1274 Gene3D - 620 683 - -
Lele03g0322 1274 MobiDBLite consensus disorder prediction 8 35 - -
Lele03g0322 1274 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 622 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0322 Lele-ChrLele03 1788671 1798500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0322 362 474 Core DNA Replication Machinery Family AT5G22010 29.204 3.02e-06 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0322 03 1788671 1798500 Lele03g0322 03 1788671 1798500 ECH
Lele01g0314 01 1794475 1803740 Lele03g0322 03 1788671 1798500 hybridization
Lele02g0306 02 1723664 1733269 Lele03g0322 03 1788671 1798500 hybridization