Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0311 ATGTTCGCCTCGACTATATTCGGATCTGACCCGCGTCATCGCGAAATTGGGAGGGATATCAGATTTGATGGATGGGATGGGATGTCTAAACTGAAAAGAGCAGAGGCGTGGCAGGCTGGTAGAGCGCGCTATCAGCCGCAGAAAGGACATCATCCAAAAATGGCTGAGCGTGCGTCCCTCACGCGTTCACCCTCCTTCCTTCCTCAACTGTCTCCAACTAAAATGGCTGCTCTCGCTTCTTCTCCTTTCATTATACCCTCCCGCACCTCACCCTCCTTCCCACTCGCTTCTTCCGCTTCTACTTCTCTCTCTACCCTCAAATGCTTAACATCCTCTTCTCCCATTTCTCACCTCTTTCTCAATCAGGCTCAGCGAGGAGTACGGGTCCGTTTATCAAATGGAGGATATAGCACAGTGTCTGCGCCCAAGTCATTCGCGTCTAATCCTGATCAATTGAGGAGTGCAAGAGAAGACATCAGACAGCTGCTCAAGACTAAGTTCTGCCATCCAATTCTGATCCGCTTGGGATGGCATGATGCTGGTACTTACAATAAAAGTATTGAGGAGTGGCCACAAAGAGGTGGAGCTAACGGGAGCTTAAGATTTGAAGTTGAACTGAAACATGCAGCCAATGCTGGGCTTGTTAATGCATTGAAACTTCTCCAGCCAATCAAAGACCAGTACTCTGGTCTGACATATGCTGATTTATTTCAGCTAGCTGCAGCTACTGCTGTGGAGGAGGCTGGTGGACCAAAAATCCCTGTGAAGTATGGAAGACTTGATGTCTCAGGACCTGATAACTGTCCTGAAGAAGGCAGACTTCCTGATGCCGGCCCCCCTTCACCTGCTGATCATTTACGGCAAGTTTTTTACAGAATGGGTTTGAATGACAGGGAAATAGTTGCACTATCTGGTGCCCACACACTGGGGCGGTCTCGACCAGAACGTAGTGGCTGGGGCAAGCCAGAGACCAAGTATACGAAAGATGGACCAGGAGAACCTGGGGGGCAATCCTGGACAGTGCAATGGTTGAAGTTTGACAACTCTTACTTCAAGGATATCAAAGAAAGAAAGGATGAAGAACTATTGGTCTTGCCAACTGATGCTGCTCTTTTTGAGGATCCGTCTTTTAAGGTCTATGCTGAGAAATATGCTGAAGATCAGGAAGCGTTCTTTAAAGATTATGCTGAAGCCCACGCCAAACTTAGCAATCTTGGAGCCAAATTTGATCCTCCTGAGGGTATTGTCATTGATGGCGGTTCTCCAAAACCTGAGCCAGAGAAGTTTGAAGCAGCCAAATACTCGACTGGAAAGAGAGAGCTGTCGGATGCTATGAGACAGAAGATTCGAGCCGAGTACGAGGCAATTGGCGGAAGCCCAGATAAGCCTCTACAGTCTAACTATTTTCTAAATATCATGATTATCATCGCCGTTTTGGCACTTTTGACATCGCTGCTCGGAAACTAG 1467 0.4778 MFASTIFGSDPRHREIGRDIRFDGWDGMSKLKRAEAWQAGRARYQPQKGHHPKMAERASLTRSPSFLPQLSPTKMAALASSPFIIPSRTSPSFPLASSASTSLSTLKCLTSSSPISHLFLNQAQRGVRVRLSNGGYSTVSAPKSFASNPDQLRSAREDIRQLLKTKFCHPILIRLGWHDAGTYNKSIEEWPQRGGANGSLRFEVELKHAANAGLVNALKLLQPIKDQYSGLTYADLFQLAAATAVEEAGGPKIPVKYGRLDVSGPDNCPEEGRLPDAGPPSPADHLRQVFYRMGLNDREIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGEPGGQSWTVQWLKFDNSYFKDIKERKDEELLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGGSPKPEPEKFEAAKYSTGKRELSDAMRQKIRAEYEAIGGSPDKPLQSNYFLNIMIIIAVLALLTSLLGN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0311 488 MobiDBLite consensus disorder prediction 314 328 - -
Lele03g0311 488 ProSiteProfiles Plant heme peroxidase family profile. 234 430 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 CDD ascorbate_peroxidase 140 410 - -
Lele03g0311 488 FunFam L-ascorbate peroxidase T, chloroplastic 277 400 - -
Lele03g0311 488 PRINTS Plant ascorbate peroxidase signature 169 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Plant ascorbate peroxidase signature 230 248 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Plant ascorbate peroxidase signature 148 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Plant ascorbate peroxidase signature 249 261 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Plant ascorbate peroxidase signature 368 392 IPR002207 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 ProSitePatterns Peroxidases proximal heme-ligand signature. 299 309 IPR019793 -
Lele03g0311 488 MobiDBLite consensus disorder prediction 41 62 - -
Lele03g0311 488 Gene3D Peroxidase, domain 2 277 400 - -
Lele03g0311 488 MobiDBLite consensus disorder prediction 264 283 - -
Lele03g0311 488 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 155 279 - -
Lele03g0311 488 SUPERFAMILY Heme-dependent peroxidases 150 408 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Haem peroxidase superfamily signature 231 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Haem peroxidase superfamily signature 299 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Haem peroxidase superfamily signature 339 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Haem peroxidase superfamily signature 249 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PRINTS Haem peroxidase superfamily signature 169 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 125 409 IPR044831 GO:0004601|GO:0034599
Lele03g0311 488 Pfam Peroxidase 156 387 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele03g0311 488 MobiDBLite consensus disorder prediction 306 338 - -
Lele03g0311 488 Gene3D - 155 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0311 Lele-ChrLele03 1728275 1732133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0311 155 405 Peroxidase AT5G66390 29.352 9.51e-18 82.4