Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0303 ATGGAACCAGAAAAGGGCAAACAATCTTCCCACAAAACCCCATACATTGAACTCGAGCAAGTTAACTCTGATTTCATCCTAGCAATCGCTTTGCAAGAGCAAGAGGGAACCTTCACCATGATGGACAGAGAAGAAAGCAGCAATGAAGATGAAGGTGAGTCCTCTTTCGAAGATGAGGATGAAGATGGAGATGCAGACTTATCCGAGAGCCAAGAATTCGAATTTGGAGAGCTCGAGTTTCTTGAGGGCGAAGGAAGCAATGACGAAGAAATGGAAGAAGATGAGATTGATCCGGATGAAATGTCGTACGAAGAGTTGATTGGGTTGGCGGAGTTCATAGGAGAAGAGAGAAGAGGATTGTCAGCGAACGAAATCCCTTCCTGCCTTCGTCCTTACACTTGCCATATTGCTGAAAACAAGACAGGCATTGATCGCTGTGTGATATGTCAGATTGAATATGAAGAAGGTGAAGCACTCATGGCGCTTCATTGTGAGCACCCTTATCATTCAGATTGCATCTCCAAGTGGTTTCAGATTAAGAAGGTTTGTCCAATTTGTGGCTGTGAAATCTCTAGAAAATAA 582 0.4364 MEPEKGKQSSHKTPYIELEQVNSDFILAIALQEQEGTFTMMDREESSNEDEGESSFEDEDEDGDADLSESQEFEFGELEFLEGEGSNDEEMEEDEIDPDEMSYEELIGLAEFIGEERRGLSANEIPSCLRPYTCHIAENKTGIDRCVICQIEYEEGEALMALHCEHPYHSDCISKWFQIKKVCPICGCEISRK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0303 193 FunFam E3 ubiquitin ligase BIG BROTHER-related 112 193 - -
Lele03g0303 193 Pfam Ring finger domain 145 186 IPR001841 -
Lele03g0303 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 192 IPR013083 -
Lele03g0303 193 SMART ring_2 146 186 IPR001841 -
Lele03g0303 193 MobiDBLite consensus disorder prediction 46 74 - -
Lele03g0303 193 SUPERFAMILY RING/U-box 145 192 - -
Lele03g0303 193 ProSiteProfiles Zinc finger RING-type profile. 146 186 IPR001841 -
Lele03g0303 193 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 4 81 IPR043312 -
Lele03g0303 193 MobiDBLite consensus disorder prediction 36 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0303 Lele-ChrLele03 1694515 1695096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0303 93 190 C3H Transcription Factor Family AT3G63530 48.515 2.91e-27 102