Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0300 ATGGGAAGCCTACAACAGCAGCTTGGAGGTAGCAGACGCATAGCAGCGGTGGACGCTTCTCCTCCGGCTCCTGTCCAAAATACAGACTCAAAACAGGAACAACCCGGTTGGAGGAAGCTTTTGGCATTTATAGGTCCTGGTTTCCTGGTTTCCTTAGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTTCAAGCTGGAGCTAACCACGGATATGAGCTGCTGTGGGTGATTCTCGTTGGGCTCATCTTCGCCCTCATCATTCAGTCCTTGGCTGCAAATCTTGGCGTAAGCACTGGCAAACACCTTTCGGAATTGTGTAAAGCGGAGTATCCATGGTTTGTCAAGTATTGCTTATGGCTATTAGCCGAGCTTGCTGTTATAGCCGCAGACATCCCTGAAGTGATTGGCACCGCCTTTGCTCTCAACATACTCTTCAAAATCCCCGTATGGGGTGGAGTTCTGGTGACTGGCTTGAGCACTCTCTTGCTTCTGGGTCTTCAAAGATTCGGGATAAGGAAGCTGGAATTGCTGATATCAACGCTGGTGCTTATAATGGCGGGATGTTTCTTCGGAGAAATGAGCTACGTAAAGCCACCAGTTTCTGGGGTACTCAAAGGCATGTTCGTCCCAAAACTCAGTGGTCAAGGAGCCACCGGCGATGCCGTTGCCCTCTTCGGTGCTCTTATCATGCCGCACAACCTTTTTCTCCACTCTGCTCTTGTGCTCTCCAGAAAAGTCCCCAATACAGTGCGTGGCATCAATGAAGCGTGTAGATATTTCCTAATAGAAAGTGGGATTGCACTCTTTATAGCGTTTTTAATCAATGTGGCAGTAGTCTCTGTATCTGGCACCGTTTGTGCTTCCTCCAACCTTTCTGACGAAAATGCGGATCATTGCAGCGATCTCACTCTTAACTCTGCTTCTTTCCTTCTCAAGAATGTTCTGGGACGGTCGAGCTCAACCATTTATGCCATCGCACTGCTTGCCTCAGGCCAAAGCTCTGCCATCACTGGCACATATGCAGGGCAATTCATAATGCAGGGTTTCTTGGACATGAAGATGAAAAAATGGATCAGGAACTTGGTGACTCGTACTATTGCCATAACTCCTAGTCTTATTGTCTCCCTTATTGGTGGATCATCTGGCGCAGGACGGCTCATCGTCATCGCCTCGATGATACTTTCATTTGAGCTTCCATTCGCTCTTATCCCACTGCTCAAGTTTAGCAGCAGCAGCACCAAGATGGGTCCTCACAAGAATTCTATGATTATCATAGTCGTATCATGGATTCTGGGGGCAGGGATCATCGGAATCAACGTGTATTACCTAAGTACAGGGTTCGTGGGTTGGCTGATTCATAGCAATCTACCAAAGGTGGCGAATGTGTTCATTGGGATCATAGTGTTCCCATTGATGGCGATTTACATTGTAGCAGTGATATACCTGACCCTAAGAAAAGACAAAGTGAAGACATATATAGAGACCAAGGACGACCCCGCAGTTCAGACCCACATGGAGAAGGGCTTCATGAACCCTAGCAATGGCCTATTGGAGTCGGGTCATGCTCCCTACAGAGAGGATTTAGACGACACCCCATTCCCCGAATAG 1611 0.4792 MGSLQQQLGGSRRIAAVDASPPAPVQNTDSKQEQPGWRKLLAFIGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVILVGLIFALIIQSLAANLGVSTGKHLSELCKAEYPWFVKYCLWLLAELAVIAADIPEVIGTAFALNILFKIPVWGGVLVTGLSTLLLLGLQRFGIRKLELLISTLVLIMAGCFFGEMSYVKPPVSGVLKGMFVPKLSGQGATGDAVALFGALIMPHNLFLHSALVLSRKVPNTVRGINEACRYFLIESGIALFIAFLINVAVVSVSGTVCASSNLSDENADHCSDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDMKMKKWIRNLVTRTIAITPSLIVSLIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIIVVSWILGAGIIGINVYYLSTGFVGWLIHSNLPKVANVFIGIIVFPLMAIYIVAVIYLTLRKDKVKTYIETKDDPAVQTHMEKGFMNPSNGLLESGHAPYREDLDDTPFPE 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0300 536 Coils Coil 534 536 - -
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 172 193 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 360 377 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 147 166 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 222 245 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 332 351 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 119 145 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PRINTS Natural resistance-associated macrophage protein signature 392 411 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 29 490 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 38 414 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 Hamap Divalent metal cation transporter MntH [mntH]. 27 448 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 Pfam Natural resistance-associated macrophage protein 61 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele03g0300 536 MobiDBLite consensus disorder prediction 513 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0300 Lele-ChrLele03 1678211 1681240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0300 10 536 Inorganic Solute Cotransporters AT1G15960 58.945 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0300 03 1678211 1681240 Lele03g0300 03 1678211 1681240 ECH
Lele01g0295 01 1687024 1691792 Lele03g0300 03 1678211 1681240 hybridization
Lele02g0282 02 1615760 1618549 Lele03g0300 03 1678211 1681240 hybridization