Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0296 ATGTCAGCCCAGAATCGGCGTCCATCCTTTTCCTCATCGACGGCGTCGTCTTTAGCAAAGCGGCATGCATCGTCGTCGGAGAATGTGGGGAAGGCTATGGCAGCCCCTTCTCACTTGGCCAAGAAGCGAGCGCCTCTCAGTAACCTGACCAATCAAAAGAATGCGTCCCACAGTGCTTTGCGAAAGTCACTGCCATCATCTACTTTGGTACCCTGCGCAACTAAAACTACTCGGACAAAGAAGAAATTCCCTGCTTGCACAACAAGCTCAGCCATTTCCGGGAATAAAATGCCTAGTTCGTCAAATGCTAAATCGACTGCAGTTGTTTTTCCCAAGGCCACTTCTTTACCACAACGGGATGAAAGTGCTTCTGCTACTGTTGCTCTTCCTTGCAGCATGGATACTTCTCCTATCAAATCAGATAGGATGTCAGTTTCTTTGGACGAGACGATGTCAACCTGTGACTCTTTCATGAGTCACGAAATTGAATATATTGACAACAGCGATGCTTCAGCTCTTGATGCTATTCACAGAAAGACATTCAGCAATCTGAACATCTCAGATGATACAGAGGCACCAGTTAATGCTTGCAGTAGAGGCATACTTGTTGACTTGGAAAGAGGTGGCAAATTTGTCAATATCGATGACAACTACTTGGATCCCCAGCTTTGTGCACCCTATGCGTGTGATATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCTACAGATTTCATGGAGAGAATTCAGAAGGACATAAATTCCCACATGCGTGCTATATTAGTTGACTGGCTTGTGGAGGTGGCTGAAGAATATAGGCTTGTGCCTGATACATTGTATTTGACAGTCAACTACTTAGATCGGTATCTTTCAGGGAATGTGATGAGTAGGCAAAAGTTACAATTACTTGGTGTTGCCTGCATGATGATTGCCGCTAAATATGAGGAGATTTGCGCGCCTCAGGTGGAGGAATATTGTTATATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCTGCCGTCTTAAATTCTCTAAAGTTTGAAATGACAGCTCCGACAATAAAATGTTTCTTAAGACGATTTGTTCGTGCAGCTCAAGGAGTCAACGAGGTGGCATCATTTCAATTAGAGTGCTTGACCAACTATATTGCCGAATTGTCTTTACTGGAGTATACAACGCTCTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATCTTCCTGGCGAAACTCATCCTTTTCCCTTCAAAAAAACCATGGAATTCCACATTGCAGCATTACACACTCTACAAGGCTTCTGATTTGCGTAACTGTGTGAAGGATCTCCATCGTCTATGTTATAACAGCCATAGTTCTAGCTTACCTGCAATAACGGAGAAATACAGTCAACACAAGTACAAATATGTGTCAAAGAAGTCGTGTCCTCCATCAATCCCTCAAGAACTTTTCCAAACTTGA 1479 0.4334 MSAQNRRPSFSSSTASSLAKRHASSSENVGKAMAAPSHLAKKRAPLSNLTNQKNASHSALRKSLPSSTLVPCATKTTRTKKKFPACTTSSAISGNKMPSSSNAKSTAVVFPKATSLPQRDESASATVALPCSMDTSPIKSDRMSVSLDETMSTCDSFMSHEIEYIDNSDASALDAIHRKTFSNLNISDDTEAPVNACSRGILVDLERGGKFVNIDDNYLDPQLCAPYACDIYKHLRASEAKKRPSTDFMERIQKDINSHMRAILVDWLVEVAEEYRLVPDTLYLTVNYLDRYLSGNVMSRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNSLKFEMTAPTIKCFLRRFVRAAQGVNEVASFQLECLTNYIAELSLLEYTTLCYAPSLIAASAIFLAKLILFPSKKPWNSTLQHYTLYKASDLRNCVKDLHRLCYNSHSSSLPAITEKYSQHKYKYVSKKSCPPSIPQELFQT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0296 492 Pfam Cyclin, C-terminal domain 359 480 IPR004367 -
Lele03g0296 492 SUPERFAMILY Cyclin-like 220 356 IPR036915 -
Lele03g0296 492 SMART Cyclin_C_2 359 482 IPR004367 -
Lele03g0296 492 MobiDBLite consensus disorder prediction 44 65 - -
Lele03g0296 492 ProSitePatterns Cyclins signature. 261 292 IPR006671 -
Lele03g0296 492 Gene3D - 230 478 - -
Lele03g0296 492 MobiDBLite consensus disorder prediction 1 65 - -
Lele03g0296 492 CDD CYCLIN 260 349 IPR013763 -
Lele03g0296 492 PIRSF Cyclin_A_B_D_E 1 491 IPR039361 -
Lele03g0296 492 SUPERFAMILY Cyclin-like 359 484 IPR036915 -
Lele03g0296 492 SMART cyclin_7 266 350 IPR013763 -
Lele03g0296 492 SMART cyclin_7 363 451 IPR013763 -
Lele03g0296 492 CDD CYCLIN 357 450 IPR013763 -
Lele03g0296 492 PANTHER CYCLINS 155 470 IPR039361 -
Lele03g0296 492 MobiDBLite consensus disorder prediction 1 24 - -
Lele03g0296 492 FunFam Cyclin A1 346 478 - -
Lele03g0296 492 Gene3D - 244 357 - -
Lele03g0296 492 Pfam Cyclin, N-terminal domain 230 356 IPR006671 -
Lele03g0296 492 FunFam Mitotic cyclin 6 244 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0296 Lele-ChrLele03 1661120 1665184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0296 4 490 Core Cell Cycle Gene Families AT1G44110 62.857 0.0 577