LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0291	ATGGCTAAGCCATTCATCCTTCTTTCCCTCCTCATCTCTCTCGTCTTCACCGTCTCGCTTGCTGCTTCACCTCCTTCTCCTTCTCCTCCTTCTTCATGTCTCTTCGATCTCACCTACGTCCTAACCTTCCCCTGGGACACTTCAACTTGCCTTCAAGTCGACCCTAAAAATGGAACCCAACACTGTTGCCAAGCCCTCCTCAGCCTCTTCGGGGTCGGACTTGCTCAGCACCTCAAAGACACCTCCGTCTTCGAACTTCCCGATGTTGATTCTTCCTCTTCTTGCCTCTCTGAGTTCAGCACCAAGCTTGCGTCTTTATCAATCCCCGCCGATATGGTCTCTACTTGCTTCCAGAACTCTACTAGGTTCGTGGCCAATACCTCGAGCTGTGCAGGAATTGAAACCGCCCAAGATTTTAATTCAAAAGTTGGCATGATGACGCCTTTAGATACATCTTGTAATGGTGACCTCATGGGGCTAACTCGATGTGGTATTTGCCGCGATGCTGGCTTCAAGGTCACTTCCCAATTGACTGCTCTGGATCCAAAAAACTCCACTAAATGTTTCTACTTCACAGTCTTATATGCTGCTGCTTTTGTTAACCAGTACGGTCCTAAAGATGTTAGAACGGCTAGTTGCATACTCGGCATGCCTCTGTCTAGCGCCGGAACGAAAGGATCGTCTGATAGAGAACGTACTCTGAAGTTGAGTTTCGGGTTATTGGGTGCGGTTGTCGGTATTCTTCTTGCTTTTATTCTGATTGCTGTCTACAGGAAGTGGGATAGGAGAAGGAGGGAAAATATTCATCACAGAGCAGTTGTGAGCAGCGTGAGGGCCAATGTTTTGCCTTACACTGGGGCGAAATGGTTCCATTTGTCAGAGCTTGAAAAAGCCACTGATAAGTTTTCGCAGAGGAATCTGATCGGTCAAGGATCTGATGGGATTGTTTACAAAGGAACTCTTCAGGATGGCGCTTTGGTTGCAGTCAAAGAGATTTTTGATTTGGAAACCAAAGGGGACGACGAGTTTTGCTATGAAGTGGAAATCATCAGCAAAATAAAGCACAGGAATCTTGTTGCTCTTCGAGGTTGTTGTGTGACAAGTGATAACACCAAAGGTAAAAGAAGATTTCTGGTTTATGATTACATGCCGAATGGAAGCCTCGGTTACCAATTATCTCTTTCTGGAGCCAACAGGCTAACATGGCCACAGAGAAAGAACATAATTCTCGACGTGGCTAAAGGGCTCTCTTATCTGCATTACGAAATCAAACCTCCAATTTATCACCGTGACATAAAGGCCACCAACATACTTCTAGACTCGACAATGAAAGCTAAAGTTGCAGATTTTGGATTAGCCAAGCAAGGCAACGAAGGCCAGTCTCATCTTACCACAAGGGTTGCTGGCACGTACGGTTATTTAGCACCAGAGTATGCTCTCTACGGGCAACTAACAGAGAAAAGTGATGTTTATAGCTTTGGCATCCTGATTCTTGAAATCATGAGCGGAAGAAAGGTGCTTGACACTTCAAACTCATCGATTCTTTTGATCACAGACTGGGCTTGGACGCATGCGAAATCAGGCAAGATAGAGGAAATATTGGAGGAGTCAATAAGAGAAGGAGGACCAAAGAGGATAATGGAGAGGTTTGTTCTTGTTGGGATCCTCTGTGCTCATGTGATGGTGGCTTTGAGGCCAACCATTTCTGAAGCCCTCAAGATGCTAGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCAGTGCCTCTGGGTCACGAGTCCTTTCAATCTTCTCTTTTGTATGGCCTTCCAAGAAGTGGAATATCTACACCGTTCGGTTCATCTATTCAAGCGTGA	1860	0.4575	MAKPFILLSLLISLVFTVSLAASPPSPSPPSSCLFDLTYVLTFPWDTSTCLQVDPKNGTQHCCQALLSLFGVGLAQHLKDTSVFELPDVDSSSSCLSEFSTKLASLSIPADMVSTCFQNSTRFVANTSSCAGIETAQDFNSKVGMMTPLDTSCNGDLMGLTRCGICRDAGFKVTSQLTALDPKNSTKCFYFTVLYAAAFVNQYGPKDVRTASCILGMPLSSAGTKGSSDRERTLKLSFGLLGAVVGILLAFILIAVYRKWDRRRRENIHHRAVVSSVRANVLPYTGAKWFHLSELEKATDKFSQRNLIGQGSDGIVYKGTLQDGALVAVKEIFDLETKGDDEFCYEVEIISKIKHRNLVALRGCCVTSDNTKGKRRFLVYDYMPNGSLGYQLSLSGANRLTWPQRKNIILDVAKGLSYLHYEIKPPIYHRDIKATNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGILILEIMSGRKVLDTSNSSILLITDWAWTHAKSGKIEEILEESIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGLPRSGISTPFGSSIQA	619

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0291	619	SUPERFAMILY	Protein kinase-like (PK-like)	286	592	IPR011009	-
	Lele03g0291	619	Pfam	SPARK	29	189	IPR043891	-
	Lele03g0291	619	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	383	583	-	-
	Lele03g0291	619	FunFam	Receptor-like serine/threonine-protein kinase At4g25390	267	382	-	-
	Lele03g0291	619	Pfam	Protein kinase domain	303	572	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0291	619	SMART	serkin_6	302	575	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0291	619	Gene3D	Transferase(Phosphotransferase) domain 1	383	581	-	-
	Lele03g0291	619	CDD	STKc_IRAK	308	577	-	-
	Lele03g0291	619	ProSiteProfiles	Protein kinase domain profile.	302	562	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0291	619	PANTHER	OS01G0750732 PROTEIN	47	583	-	-
	Lele03g0291	619	Gene3D	Phosphorylase Kinase; domain 1	263	382	-	-
	Lele03g0291	619	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	427	439	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0291	Lele-ChrLele03	1627723	1629582	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0291	28	597	Receptor kinase-like Gene Family	AT1G11050	53.504	0.0	587

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RKF3	Lele03g0291		Pkinase	1e-43	CL0016