Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0261 ATGGAGAGCCCTCCTTCAACGTCTTATGTGATCCTTGCATGTGATGCCACCAAAGATAGCAGTGAGCATGAGATCAAATCCATTCTTAATCACGTACGAGGTACCGATGGCATTTTATATGCGGGTCACAAATTGCTCGTGCTCGGGGTCTTGCATAGGGTGCCACACCCCATGGGGTACCAGACCTTACCATGCCCCGAGTCTTTTGCTGGCACGAATGTCCGTGCAATGGATGAAGTAGTTGGCAAGAAACTTGATTCATATGCAAATATGCTTTTGCCAATGTATGAAGATTGGCAAAATGCAGGGATAAGCATCGAAGTCAAAATCACTGCAGGTTTTCCAATCAAACAGGTTATATTGCAAGAGGTTGCATGCTATAACGCAGCTTGGATTGTACTTGATAGGCACCTTCGACGGGACTTGAGATTCCTTAACAAGATATCATCCAAGGTTGCACTGGTTAAAGATGACTTGTTCGTGTACATCTGGAGATCTCATGAATCAGTTGAAACAGATTTCACAGAAAACAAGCTTGCTTATTCTCTGTCTAAATTTGTTTCTCTATCTGATTGTCAAAGTGTTGCAGACATTGGGCATTCTATTTCCTCTTTCAAAAACTGTCCCCCATCCATGGTTTCTTCTGACAACACAGACACATTTAGGAACAGCACAAAGCACTCATTTGCATCACGTGAACAATTATTCTCATCAGATCCTGAGTCGTCTTCTGAACAAGGTCCCCTTACTTCTCAGATTGCCCAAAAGCAAAACAAGTATGGGTTTATGCCTAAATTTTCAGATGCTCAAATTCTTTGTGCTCGTTGTGGGATGAGGACTGAATTGTATGCTAAGGAGTCGATGAGGTTCAGCTATTCTGATATACAGATTGCAACAAACGATTTTTCAAAGGATAACTTACTGGGTGAAGGTGGTTATGGTCACGTATACAAGGGTATTCTTAGAGATGGACAGCAAATTGCTGCAAAGGTAAGAAAAGAAGAAAGTAGCCAGGGTTTTTCTGAATTTCATTCTGAGGTTTATGTCTTAAGTTTTGCACGACACAAGAATATAGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAACAAGTCACTTGACTGGCATTTATTCGATAGAGATGCTGCAGTTCTCGAGTGGCCCCAGAGATTTGCCATTGCCATTGGAACTGCAAAAGGATTGCGCTTTCTCCACGAAGAATGCCGTGGGGGCCCCATCATTCATCGAGATATGCGACCTAGCAATATACTTCTTACTCATGATTTCGTTCCCATGCTTGGTGACTTTGGCCTTGCCAAATGGAAGACCGGTAGCGATGAGATGATGCAAACGAGGATAATGGGCACATTGGGATACCTTGCTCCAGAGTATGCTGAAGATGGCGTTGTTTCTGTGGGGACAGATGTGTATGCTTATGGAGTTGTTCTGTTACAGTTAATGTCAGGACGCAAGGTGCGCATGTCCAGTAATCCTGATCAACCATCTCTCCGTCAATGGGCTGAGCCATTGATTGAGAAGTTGGCTTTACCAGAAATCATAGACCCACGTCTTGGGGTGTCATATGACACATATGAACTATACCTATTGGCAAAAGCAGCATACTTGTGTGTTCAAAGAAAGCCTGAGATGCGACCATCCATGGCAGAGGTAGCTCGCCTTCTTGAAGGAGAAAATGATCGCTTCCATGCCTTGGCAGATCAGTTCGTGCCTAATTACTATCAATGA 1776 0.4313 MESPPSTSYVILACDATKDSSEHEIKSILNHVRGTDGILYAGHKLLVLGVLHRVPHPMGYQTLPCPESFAGTNVRAMDEVVGKKLDSYANMLLPMYEDWQNAGISIEVKITAGFPIKQVILQEVACYNAAWIVLDRHLRRDLRFLNKISSKVALVKDDLFVYIWRSHESVETDFTENKLAYSLSKFVSLSDCQSVADIGHSISSFKNCPPSMVSSDNTDTFRNSTKHSFASREQLFSSDPESSSEQGPLTSQIAQKQNKYGFMPKFSDAQILCARCGMRTELYAKESMRFSYSDIQIATNDFSKDNLLGEGGYGHVYKGILRDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLDWHLFDRDAAVLEWPQRFAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGSDEMMQTRIMGTLGYLAPEYAEDGVVSVGTDVYAYGVVLLQLMSGRKVRMSSNPDQPSLRQWAEPLIEKLALPEIIDPRLGVSYDTYELYLLAKAAYLCVQRKPEMRPSMAEVARLLEGENDRFHALADQFVPNYYQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0261 591 CDD STKc_IRAK 308 573 - -
Lele03g0261 591 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 274 377 - -
Lele03g0261 591 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lele03g0261 591 Gene3D Transferase(Phosphotransferase) domain 1 379 585 - -
Lele03g0261 591 SUPERFAMILY Protein kinase-like (PK-like) 286 572 IPR011009 -
Lele03g0261 591 ProSitePatterns Tyrosine protein kinases specific active-site signature. 423 435 IPR008266 GO:0004672|GO:0006468
Lele03g0261 591 Gene3D Phosphorylase Kinase; domain 1 269 377 - -
Lele03g0261 591 Pfam Protein kinase domain 303 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0261 591 FunFam Lectin-domain containing receptor kinase A4.3 378 591 - -
Lele03g0261 591 ProSiteProfiles Protein kinase domain profile. 302 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0261 591 PANTHER OS01G0750732 PROTEIN 232 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0261 Lele-ChrLele03 1436034 1439327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0261 290 572 Trihelix Transcription Factor Family AT5G38560 44.483 1.95e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele03g0261 Pkinase 4.3e-38 CL0016