Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0255 ATGCTAAGAAGTTTCGGTGAAAATCGTTTACTGACATTCTATGTGAGCAACCTAATCAAGGACAAAACCATGTCATTAGTTAGATCTGCTGAGCTGGCAGCTACACAACATAGAAATGCTAAACTCTACTCGCTAAAGGGATCAGATGCCAAGCCAGGGCTGTCCTCCCAAAGTTTTGATGCTGATAAGCAAAGAAGTATGTACATGACAGATTCTTGCTCCAGTGAGAGTTATGACAAGTACTTCCATGATTCACCCACAGAAGAACTGATAGAACCATCTAGTTCTGGGGTCTCAAGCAATTCATTTCGCCCGGACGATGCTTCTCCTTACCAGCCTAGAGCTAGTTCAGGAGCTTCTATGGTTGCTAATAACCCATTTGATACTTCTTTCAGGTCCCCGAGGCGTCGTGATGATGCCTATTATCAATCCAATTTTAGGTCAAATTTCTCAGAAAGTGAAAGCCTGGATGCACTTGACTTCAATGGTCAAATGAGATTAAAACTGCAAGAATTAGAGAGGGTCCTGCTTGATGATGAAGAAGACATATTTGAGACTTCTCAAAGCATGGAAATTGACCCTGAGTGGGCTGATCCCATTCAGAACATGCAGCTCCATGACTCACCAAAGGAGTCTTCATCCTCAGATTCTAATCTCAGCAGCATCAGTTGCAACAAAGAAGTATCACATATCTCTCATCGGAGCCCCAGGCAAATGCTTCTTGAATGTGCAGGTGTACTTTCAGAAGGAAATTTAAAGGAGGCGTCGAATATGATAAATGATCTCCGGCAGATGGTCTCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCCTGGCTGAGTCTGGCAAGGGTATTTACAAAGCTCTGAAATGCAAGGAGCCTCCTTCTTCAGATCGTCTGGCAGCAATGCAGATATTGTTTGAAGTGTGCCCATGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGATGAAACCCAGGTGCACATCGTAGATTTTGACATCAACCAAGGAAGCCAATACATAACTCTCCTACAAACACTTGCTTCAAGGCCAGGCAAGCCACCCCACGTCAGATTGACTGGAGTTGATGATCCAGAATCTGTACAACGATCTGTTGGAGGCCTGAAGATCATAGGACAGAGACTTGAGAAGCTAGCAGAAGCACTGGAGCTTCCATTTGAGTTTCGAGCCTTGCCGTCGAGGACATCCCTTGTCACCCCTTCAATACTCAAATGTCGGCCTGGTGAAGCACTTGTGGTGAACTTCGCATTTCAGCTGCACCACATGCCGGATGAGAGTGTTTCCACAGTGAACGAGAGAGATCAACTCCTCCGCATGGTTAAGAGCCTAAGTCCAAAACTTGTGACAGTTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTTCCAAGATTCGTAGAAGCTTACAATTATTACTCTGCTGTTTTCGAGTCGCTTGATGCGACTCTTCCCAGGGAGAGCCAGGACAGGATGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAACATTGTTGCATGTGATGGCGAGGATCGGATTGAAAGGTATGAAGTTGCCGGGAAATGGAGGGCGAGAATGGCCATGGCTGGCTTCACTTCATCTCCACTGAGCAGTCACGTGACCGAGTCAATTCGGAAGCTCATCAGGCAGTATTGTGAGAGGTACAAGATGAAGGAGCAAATGGGTGCACTCCTTTTTGGGTGGGAAGACAAGAACTTGATTGTAGCTTCGGCGTGGAGGTGA 1821 0.4574 MLRSFGENRLLTFYVSNLIKDKTMSLVRSAELAATQHRNAKLYSLKGSDAKPGLSSQSFDADKQRSMYMTDSCSSESYDKYFHDSPTEELIEPSSSGVSSNSFRPDDASPYQPRASSGASMVANNPFDTSFRSPRRRDDAYYQSNFRSNFSESESLDALDFNGQMRLKLQELERVLLDDEEDIFETSQSMEIDPEWADPIQNMQLHDSPKESSSSDSNLSSISCNKEVSHISHRSPRQMLLECAGVLSEGNLKEASNMINDLRQMVSIQGDPPQRIAAYMVEGLAARLAESGKGIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDETQVHIVDFDINQGSQYITLLQTLASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEALELPFEFRALPSRTSLVTPSILKCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLSPKLVTVVEQDVNTNTTPFFPRFVEAYNYYSAVFESLDATLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSSPLSSHVTESIRKLIRQYCERYKMKEQMGALLFGWEDKNLIVASAWR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0255 606 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 204 601 IPR005202 -
Lele03g0255 606 MobiDBLite consensus disorder prediction 85 135 - -
Lele03g0255 606 MobiDBLite consensus disorder prediction 89 130 - -
Lele03g0255 606 Pfam GRAS domain family 237 606 IPR005202 -
Lele03g0255 606 ProSiteProfiles GRAS family profile. 227 606 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0255 Lele-ChrLele03 1388441 1391637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0255 19 606 GRAS Transcription Factor Family AT1G21450 62.901 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele03g0255 GRAS 1.7e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0215 25 1275162 1276901 Lele03g0255 03 1388441 1391637 CCT
Lele03g0255 03 1388441 1391637 Lele03g0255 03 1388441 1391637 ECH
Lele01g0248 01 1406450 1408072 Lele03g0255 03 1388441 1391637 hybridization
Lele02g0240 02 1361568 1363193 Lele03g0255 03 1388441 1391637 hybridization