Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0252 ATGGTACCCCCGGGACCACCCACTCCAATTGGTGGTGCCCAGGCTGTCTCACCCTCCCTTCTGAGATCTAATTCTGGAATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTTCCCTCGCTCGTGTCTCCGCGGAATCAGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCTTCCATGCTGAATCAGCCTTTCCCAAATGGGGTTCCAAATTCTGCGCTCTCTGGTCCAGGAAGTAGCCAGCGAGGAGGCATTGATACCGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAGCTTCAATAATAACTCATCCTCGTTTGTACAATCAAATATGGTGAATCCTGGTCCATCTGGTCAAGGTCAGGGTCAACAATTTTCAAATCCTTCTGGTAACCAAATGTTGCCAGATCAACTGCATTCACAACAACTTGACACTCAAAATTTCCAACATAGTCAGCAGTCATTGCAACAGTTCTCAGCTCCTCTGAACTCTCAGCAACAACAGCAGCAGCAACATTTTCAATCAATTCGAGGAGGGATAGCTGGCATAGGACCTGTTAAATTGGAGCCCCAAGTAAACAACGATCAACTTGGGCAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCACCAGTGAAATTGGAACCTCAACAAATGCAAACAATGAGATCTATGGCTCCAGTGAAAATGGAGCCCCAGCATTCTGACCAGGCATTATTTTTGCATCAACAGCAACAGCAGCAGCAGCAGCAACAATACCTCCACATGTCAATGAAACCCTCTCAGGCTACTGCTGCTCAGCTTAATCTATTGCACCACCAGAGACTGTTGCAATTACAACAGCACCAACAACAACAGCAACAACAACAACAACAACAACTCTTGAAGGCAATGCCTCAACAACGGCCACAACTACAACAGCAGTTTCAACAGCAGAACATGCCTATAAGGACTTCCGGAAAGCCAGTTTATGAACCTGGAATGTGCGCTAGGCGGCTGACGCATTACATGTATCAGCAACAGCATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCGCCTAATGCCAAAAAGAAGTGGTGCGTTTCTATGTATGGTAGCGGCAGACATACAACTGGGGTTTTTCCTCAGGACGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTACTTCCCAGGCTCTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTACGTAGACATGCCTCGCGAGTATCATAATTCCTCTGGTCAGATTGTTCTGGACTATGCGAAAGCAATACAAGAAAGTGTTTTTGATCAACTCCGTGTTGTTCGTGATGGTCAACTTCGGATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAGGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGGCTTTTACTCAGAATGCAACACCTAATTTATCTGTTCCTGAGTTACAAAATAATTGCAATATGTTTGTGGCATCCGCTCGTCAGTTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAAAAGGGATCGGACCTATGGAAAGCTTGGCCAAATATCCTCGGAGAACTGCTAGTTCATCTGGAGTCAATAGTCAAGCTCAGCAACTGCCTGAAGATCAATTACAGCAGCAACAGCAACAACAAATGGTGGCCCAAAACTCAAATGGTGATCAAAACTCGGTGCAACCTGCTGCCATGCAAATAGCTTCTAGCAATGGGGTGGCTGGTGTAAATAGCTGTGTCAACTCGGTATCTGCATCAACTACCCCAAGCACTATTGTTGGACTTCTCCACCAGAACTCTATGAATTCTAGACAACAGAATTCCATGAACAATGCCAGCAGTCCGTATGGAGGTAGTTCTGTTCAGATACCATCCCCAGGTTCGTCCAGTACTGTGCCACCAGCACAGCCAAACACGTCACCCTTTCAAGCGCCTACACCATCATCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCTGGCAATCACATGAATTCATCTAATTCACCAGCTAATGTTTCCTTGCAACAACAGTCATCCCTTTCTGGTGAAGCTGACCCCAGAGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGGATATACACCCAAAATAATGGCACTGGCGGAATGGTAGGTGTCAGCTCTTTTGGAAATGATGTCAAGAATGCGAATGGGATTATGCCAGTAAGTAGCAACACAGGTCTCAATAGTGGCAACTGCCTGCCTGGCAATGGGCCTGTGAATGGTAATTCAGGTGTTGGGGTTGGTGGATATGGTACGATGGGCGGTGGGCTCGGTCAATCTGCTATGGTCAATGGGATCAGAGCCGCGATGGGAAATAACTCTATTATGAATGGGAGGGGAGGAATGGCAACTATTGCTCGAGACCAAGCTATGAATCATCAGCAAGATTTGTCAAACCAACTAATTAGTGGACTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAATCTTCCCCATGA 2748 0.4498 MVPPGPPTPIGGAQAVSPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRNQFNNMNMLGNMSNVSSMLNQPFPNGVPNSALSGPGSSQRGGIDTGAKTDPLSSVGNGMSFNNNSSSFVQSNMVNPGPSGQGQGQQFSNPSGNQMLPDQLHSQQLDTQNFQHSQQSLQQFSAPLNSQQQQQQQHFQSIRGGIAGIGPVKLEPQVNNDQLGQQQQMQSLRNLAPVKLEPQQMQTMRSMAPVKMEPQHSDQALFLHQQQQQQQQQQYLHMSMKPSQATAAQLNLLHHQRLLQLQQHQQQQQQQQQQQLLKAMPQQRPQLQQQFQQQNMPIRTSGKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFDQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTASSSGVNSQAQQLPEDQLQQQQQQQMVAQNSNGDQNSVQPAAMQIASSNGVAGVNSCVNSVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPPAQPNTSPFQAPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQSSLSGEADPRDAQSSVQKILSGIYTQNNGTGGMVGVSSFGNDVKNANGIMPVSSNTGLNSGNCLPGNGPVNGNSGVGVGGYGTMGGGLGQSAMVNGIRAAMGNNSIMNGRGGMATIARDQAMNHQQDLSNQLISGLGAVNSFNNLQFDWKSSP 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0252 915 Pfam LIM-domain binding protein 342 596 IPR029005 -
Lele03g0252 915 MobiDBLite consensus disorder prediction 65 178 - -
Lele03g0252 915 MobiDBLite consensus disorder prediction 600 642 - -
Lele03g0252 915 MobiDBLite consensus disorder prediction 300 322 - -
Lele03g0252 915 PANTHER LIM DOMAIN-BINDING PROTEIN 209 904 IPR029005 -
Lele03g0252 915 MobiDBLite consensus disorder prediction 23 47 - -
Lele03g0252 915 MobiDBLite consensus disorder prediction 684 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0252 Lele-ChrLele03 1374174 1380452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0252 1 913 C2H2 Transcription Factor Family AT1G43850 60.441 0.0 780
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0252 03 1374174 1380452 Lele03g0252 03 1374174 1380452 ECH
Lele01g0245 01 1392291 1398594 Lele03g0252 03 1374174 1380452 hybridization
Lele02g0237 02 1345228 1352281 Lele03g0252 03 1374174 1380452 hybridization