Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0243 ATGAAAGTAGCTGCGGTGGCTTGGGAAGCAGGGAAGCCACTGGTGATCGAAGAGGTAGAGGTAGAACCTCCCCAGGCTGGAGAAGTGCGTCTGAAAATCCGCTTTACCTCTCTTTGCCATACTGACGTTTACTTCTGGGAAGCCAAGGGACAAACTCCACTGTTCCCTCGTATATTTGGCCACGAAGCCGGAGGGATTGTGGAGAGTGTAGGGGAGGGAGTGACTCATCCGAAACCAGGAGATCATGCTCTTCCAGTATTCACGGGAGAGTGTGGGGAGTGCCCACATTGTAAGTCGGAAGAAAGCAACGAGCGCGACCTTCTCAGGATCAACACAGATAGGGGTGTTATGATCAGTGACGGCAAGTCCAGATTCTCTAAGAACGGACAGCCAATACACCATTTTGTGGGAACTTCCACATTCAGCGAGTGCACTGTTGTGCATGCTGGTTGTGTTGCTAAGATTGACCCTGCTGCTCCTCTTGACAAAGTTTGTGTCCTCAGCTGTGGAATCTGCACAGGATTTGGTGCTACCGTAAATGTTGCAAAACCAAAACCCGGTTCCTCCGTTGCCATTCTTGGACTGGGAGTTGTTGGCCTCGCCGCCGTTGAAGGGGCAAGGGTTTGTGGTGCATCTAGAATTATTGGGGTTGATTTAGTTTCCAGCCGTTTTGAGGAAGTTGTGAACACTCAACATGTAATAGCTGAAATGACAAATGGAGGCGTGGATCGTGCGGTCGAGTGCAGTGGGAGCATCCAGGCCATGATCTCAGCATTTGAATGGGTCCTTGTTGGACTGCCAAACAAAGAGGATGCATTCAAAACTCATCCAGTGAATTCCTTGAACACTCTGAAGGGCACCTTCTATGGCAATTATAAGCCTCGTTCTGATTTGCCTTCTGTTGTGGAGATATACATGAAAGGGGGCCCTGCTTTCCCCACATCACAAGTTCAACAACACAACAACTTCCAACAATTTCTCACTATCATCATCGTCCTTCATACTCAGTGCTCAGAATCAACTATGTCTAGCACAGCTGGTCAGGTTATCAAATGCAGAGCTGCGGTGGCTTGGGAAGCAGGGAAGCCACTGTCGATCGAAGAGGTAGAGGTGGCTCCTCCACAGGCCGGAGAAGTGCGTCTCAAGATTCTCTTCACGGCACTCTGCCATACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACTCCAGTGTTCCCTCGTATATTAGGCCACGAAGCCGGAGGGATTGTGGAGAGCGTCGGGGAGGGAGTGACTCATCTGAAACCAGGAGATCAAGCTCTTCCGGTGTTCACGGGAGAGTGTGGGGAGTGCCCACATTGTAAGTCGGAAGAAAGCAACATGTGCGATCTTCTCAGGATCAACACAGATAGGGGTGTTATGATCAGTGACGGCAAGTCCAGATTCTCTAAGAATGGACAGCCAATATACCATTTTGTGGGAACTTCCACATTCAGCGAATACACTGTTTTGCATGCTGGATGTGTTGCTAAGATTAACCCTGCTGCTCCTCTGGACAAAGTTTGTATTCTCAGCTGCGGAATCTGCACAGGATTTGGTGCCACCGTAAATGTTGCCAAACCAAAACCTGGTTCCTCTGTCGCCATTTTTGGATTGGGAGCTGTTGGCCTCTCTGCTGCTGAAGGGGCAAGGATTTCTGGGGCATCGAGAATTATTGGGGTTGATTTAGTTTCCAGCCGTTTTGAGCTAGCTAAGAAGTTTGGAGTTAATGAGTTTGTGAACCCCAAAGATCATGAGAAACCTGTACAAGAGGTAATAGCTGAAATGACAAATGGAGGTGTGGATCGTGCGGTTGAGTGCACCGGGAGCATCCAGGCTATGATCTCGGCATTCGAATGTGTCCACGATGGATGGGGTGTGGCGGTACTGGTTGGAGTGCCAAACAAAGATGACGCGTTCAAAACTCATCCAGTGAATTTCCTGAACGAGAGGACTCTGAAGGGCACATTCTATGGCAATTACAAGCCCCGTTCTGATTTGCCTGCTGTTGTGGAGATGTACATGAGAGGGGAGCTGGAACTGGAGAAGTTCATCACTCATTCGGTGCCTTTATCGGAGATCAACAAGGCATTTGACTACATGCTCAAGGGGGAGTCCATCAGGTGCATCATTAGCATGCAAGAGTAG 2166 0.4926 MKVAAVAWEAGKPLVIEEVEVEPPQAGEVRLKIRFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHPKPGDHALPVFTGECGECPHCKSEESNERDLLRINTDRGVMISDGKSRFSKNGQPIHHFVGTSTFSECTVVHAGCVAKIDPAAPLDKVCVLSCGICTGFGATVNVAKPKPGSSVAILGLGVVGLAAVEGARVCGASRIIGVDLVSSRFEEVVNTQHVIAEMTNGGVDRAVECSGSIQAMISAFEWVLVGLPNKEDAFKTHPVNSLNTLKGTFYGNYKPRSDLPSVVEIYMKGGPAFPTSQVQQHNNFQQFLTIIIVLHTQCSESTMSSTAGQVIKCRAAVAWEAGKPLSIEEVEVAPPQAGEVRLKILFTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTHLKPGDQALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMISDGKSRFSKNGQPIYHFVGTSTFSEYTVLHAGCVAKINPAAPLDKVCILSCGICTGFGATVNVAKPKPGSSVAIFGLGAVGLSAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHEKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRSDLPAVVEMYMRGELELEKFITHSVPLSEINKAFDYMLKGESIRCIISMQE 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0243 721 SUPERFAMILY GroES-like 669 717 IPR011032 -
Lele03g0243 721 FunFam alcohol dehydrogenase 1-like isoform X1 360 523 - -
Lele03g0243 721 Gene3D - 11 309 - -
Lele03g0243 721 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 308 IPR036291 -
Lele03g0243 721 FunFam Alcohol dehydrogenase class-P 524 662 - -
Lele03g0243 721 Pfam Zinc-binding dehydrogenase 547 678 IPR013149 -
Lele03g0243 721 PANTHER ALCOHOL DEHYDROGENASE 347 717 - -
Lele03g0243 721 SUPERFAMILY GroES-like 345 527 IPR011032 -
Lele03g0243 721 FunFam S-(hydroxymethyl)glutathione dehydrogenase 174 287 - -
Lele03g0243 721 CDD alcohol_DH_plants 350 717 - -
Lele03g0243 721 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 60 74 IPR002328 GO:0008270|GO:0016491
Lele03g0243 721 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 410 424 IPR002328 GO:0008270|GO:0016491
Lele03g0243 721 SUPERFAMILY GroES-like 4 177 IPR011032 -
Lele03g0243 721 Pfam Alcohol dehydrogenase GroES-like domain 377 504 IPR013154 -
Lele03g0243 721 Pfam Alcohol dehydrogenase GroES-like domain 27 104 IPR013154 -
Lele03g0243 721 Gene3D - 524 662 - -
Lele03g0243 721 Gene3D - 174 287 - -
Lele03g0243 721 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 510 684 IPR036291 -
Lele03g0243 721 Gene3D - 361 711 - -
Lele03g0243 721 FunFam alcohol dehydrogenase 1-like isoform X1 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0243 Lele-ChrLele03 1328470 1334949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0243 342 721 Monolignol Biosynthesis Gene Families AT1G72680 24.352 7.88e-14 71.6