Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0231 ATGAGAAACAGACTGGAATCGTTGTTCTTGTTCTCAGCAGCCCTCACGATTGGAGCAATGTTCTTTCGTGCTGGAGCCGAGCCGGTGGAAGATAAAGGAGCCTTGCTTCACTTCCTCCACAACATAAACCACTCTCTTGCTCTAAACTGGGATGAGAAAGCTTCTGTATGCAATAGCTGGAGAGGAATCACCTGCGATGGAGACCATTCCAGAGTCATAGCCCTTCATTTACCTGCAGCTGGATTGAGCGGTCCAATACCACCGAAGACCCTAAGTCGCCTCTCAGCACTTCAGATTCTGAATCTAACATCCAATAGCATGACGGGTCCTTTTCCTTCTGGTTTCTCTGAGCTTAAGGATTTGACCTATCTTAACATTCAGTTCAACGAGTTTTCTGGCCCATTGCCATCAGATTTCTCAGTTTGGAAGAACTTGACCATTGCTGATTTATCCAACAATTTTTTTAATGGGAGCATTCCTTCATCAATTTCGAATCTGATTCATCTCACATCTTTAGTCCTGGCAAATAACTCGCTTTCGGGTGAAATTCCTGATATCAATATTCCTACCCTGCAAGAGCTGACTCTGGCCAACAATAACCTTAGTGGGATGGTGCCCAAATCCCTCATAAGATTCCCAGGCTGGGCGTTTTCAGGGAACAATCTTTCATTTGCAAATGCTCTACCAAGAAAAAGAACCTCAAAAAGACTTGGTAAGTCTGCATTAATAGGTGTTTTTCTAGGTTGTACTGGGCTGGCATTCGGAGTTGTTGCAGCTTTCTTGCTTTTGTGCTACTACGATAAAGGAGGTGAAAATGGGCTGGCAATGAAATCCCAGAAGAAAGACATGTTTCTGAAAAAGGATATCTCTGAGAGTCATTGCAGAAAAAACAAAATTGAGTTCTTTGAGGATTGCAATTTCGCGTTTGACCTGGAGGATCTGTTGAGAGCATCTGCTGAGGTGCTTGGTAAGGGGACCTATGGTACAACATATAAGGCAAATATAGAGGACGCTACTACTGTGGTGGTGAAGAGATTGAAAGAAGTCGTCATCGGAAAACGTGAGTTTGAACAGCAGATGGAGTCTGTGGGAAGTATTAGGCACGACAATGTGGCGGCTTTAAGGGCATATTACTATTCCAAGGAGGAGAAACTTATGATCTATGACTACTATGAACGCAGTAGCGTTTCTGCTATGTTGCATGGTAGAAGAGGGGAAGAAAGGATTTCTTTAGATTGGGATAGCAGGCTGAGGATAGCAATAGGTGCAGCAAGAGGCATTGCTCACGTCCATGCTCAACAAGGAGCAAAACTCGTCCATGGAAACATAAAAGCCTCCAACATCTTCCTTAACTCAGAAGGGTATGGCTGTATTTCTGACATTGGTTTAGCAACACTCATGAGTCCAATACTGCCACCGTCTCTAAGAAGTTCCGGCTACCGTGCTCCAGAAGTAACAGACCCCAAAAAAGCAAGTCACGCGTCTGATGTCTACAGTTTTGGAGTGTTTCTGTTGGAGCTTTTGACCGGAAAAGGACCCATGCACGCCACAGGAAGTGAGGAGGCCGTCCACCTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCTGAAGTATTCGATGTACAATTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTACAAATGTTACAACTTGCGATGGCATGTGTTGTTAGAGTTCCAGAGCAGAGACCAAAAATGTCGGATGTTTTCAGAATGGTGGAGGAAATTCTTCGACCAAATACTGAGAATCGGCTGTCATCTGGGTCCAGATCAGCGGCTTCTACCCCAACACCACCAGCAATTGACGTACCTTCTTCCTCCGTGGATGCTAAGAATTAA 1872 0.4466 MRNRLESLFLFSAALTIGAMFFRAGAEPVEDKGALLHFLHNINHSLALNWDEKASVCNSWRGITCDGDHSRVIALHLPAAGLSGPIPPKTLSRLSALQILNLTSNSMTGPFPSGFSELKDLTYLNIQFNEFSGPLPSDFSVWKNLTIADLSNNFFNGSIPSSISNLIHLTSLVLANNSLSGEIPDINIPTLQELTLANNNLSGMVPKSLIRFPGWAFSGNNLSFANALPRKRTSKRLGKSALIGVFLGCTGLAFGVVAAFLLLCYYDKGGENGLAMKSQKKDMFLKKDISESHCRKNKIEFFEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANIEDATTVVVKRLKEVVIGKREFEQQMESVGSIRHDNVAALRAYYYSKEEKLMIYDYYERSSVSAMLHGRRGEERISLDWDSRLRIAIGAARGIAHVHAQQGAKLVHGNIKASNIFLNSEGYGCISDIGLATLMSPILPPSLRSSGYRAPEVTDPKKASHASDVYSFGVFLLELLTGKGPMHATGSEEAVHLVRWVNSVVREEWTAEVFDVQLLRFPNIEEEMVQMLQLAMACVVRVPEQRPKMSDVFRMVEEILRPNTENRLSSGSRSAASTPTPPAIDVPSSSVDAKN 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0231 623 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 391 598 - -
Lele03g0231 623 PANTHER OS05G0588300 PROTEIN 14 600 - -
Lele03g0231 623 Gene3D Ribonuclease Inhibitor 29 229 IPR032675 -
Lele03g0231 623 Gene3D Transferase(Phosphotransferase) domain 1 392 604 - -
Lele03g0231 623 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Lele03g0231 623 Pfam Protein kinase domain 319 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0231 623 SUPERFAMILY L domain-like 41 211 - -
Lele03g0231 623 MobiDBLite consensus disorder prediction 592 623 - -
Lele03g0231 623 FunFam pollen receptor-like kinase 1 286 390 - -
Lele03g0231 623 MobiDBLite consensus disorder prediction 592 613 - -
Lele03g0231 623 SUPERFAMILY Protein kinase-like (PK-like) 320 584 IPR011009 -
Lele03g0231 623 ProSiteProfiles Protein kinase domain profile. 316 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0231 623 Pfam Leucine rich repeat 86 130 IPR001611 GO:0005515
Lele03g0231 623 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Lele03g0231 623 ProSitePatterns Protein kinases ATP-binding region signature. 322 353 IPR017441 GO:0005524
Lele03g0231 623 Gene3D Phosphorylase Kinase; domain 1 282 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0231 Lele-ChrLele03 1259113 1261375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0231 20 612 Receptor kinase-like Gene Family AT4G23740 53.712 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele03g0231 Pkinase 3.8e-31 CL0016