LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0228	ATGTCGTTGCCCGTACTGGACGCTCTTGACTCGGCTCGTACGCAATGGTATCACGTGACAGCCATAGTGATCGCCGGCATGGGCTTCTTCACCGATGCCTATGACCTCTTCTGCATCTCCACCGTTTCTAAACTGTTGGGCCGTCTCTACTACTTCGACCCCACCTCCGCGAAACCTGGGAAGCTCCCCCCTCACGTCAACAACACCGTCATCGGCACCGCCCTCATAGGAACCCTCTGCGGCCAGCTAGTCTTCGGCTGGCTCGGAGACAAGCTTGGGCGCAAGAAAGTCTATGGCATCACTCTCATTCTCATGATCGTTTTCGCCATATGTTCCGGCCTCTCCTTCGGTTCTTCGGCCCACTCCGTTATGAACACCCTCTGCTTCTTCCGATTCTGGCTGGGCTTTGGTATTGGTGGTGACTACCCTCTATCTGCAACCATCATGTCCGAGTACGCTAACAAAAGGACCCGTGGGGCTTTCATCGCCGCCGTTTTCGCCATGCAAGGCGTTGGAATTATATTCGGTGGCTTGGTCGCCATGGGGTTATCCTACGTTTTCTTGTCAAACAACCCCGCCCCAACATATCACGAGAACAAAATCTTGTCGACCCAGCCCGCAGGCGACTACCTGTGGAGATTAGTTCTTATGGTCGGAGCCGTTCCGGCGGCGTTGACGTTCTACTGGCGAATGAAGATGCCGGAAACGGGCCGCTACACGGCTCTAATAGAAGGTAATGCAAAACAAGCGGCCGCCGACATGGCCAGGGTTTTGGACGTCGAAATCCAAGCAGAGCAGGAGAGGATAGCTCAGTTCAAAGCTGACAACGAGTATTCACTATGGTCTAACGAGTTCTTTGCGAGACACGGGCGTCATTTGATCGGAACCATGAGCACGTGGTTCTTGTTGGACATTGCTTTTTACAGCCAAAATTTAACCCAGAAGGATATTTTCCCAACGATGGGCTTAGTCCACAAGGACCCTGATATGAATGCATTGCAGGAAGTGTACGAGACGTCACGTGCCATGTTCGTGATTGCCCTGCTCGGGACGTTCCCGGGGTATTGGTTCACCGTGGCTTTCATTGAAAAGCTGGGGCGTTTCAAGATCCAACTGATCGGCTTCTTCATGATGTCGTTTTTCATGTTCGTGATTAGTGTGAAATACGAAGCCATGAAGAGTAACAAATACCTGTTCGCTTTGCTGTATGGGCTCACGTTTTTCTTCGCCAACTTCGGGCCCAACAGCACGACGTTCGTGCTGCCGGCGGAGCTGTTCCCAACAAGGGCGAGGTCCACGTGTCACGCGCTGAGCGCGGCGTCGGGGAAAGCGGGGGCGCTGGTGGCGGCGTTTGGACTGCAGAATTTCACGCAGGGTGAGGACGTGGGGAAAATAAAGACGGCAATGAAGATACTGGCGGTGACCAACTTTTTGGGGTTCTGCTTCTCCTTCCTGTTGACCGAAACAAAAGGGCGGTCTCTTGAGGAAATCTCCGGCGAGGACGGGAGAGAAGCCGAGCCCGCACCGTCACCGAATAGCAGGGTGGTCACTCGCCAGCAGGGACCTCACTCCGAGACTTTTACCAAGGATTGA	1593	0.5386	MSLPVLDALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPTSAKPGKLPPHVNNTVIGTALIGTLCGQLVFGWLGDKLGRKKVYGITLILMIVFAICSGLSFGSSAHSVMNTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFGGLVAMGLSYVFLSNNPAPTYHENKILSTQPAGDYLWRLVLMVGAVPAALTFYWRMKMPETGRYTALIEGNAKQAAADMARVLDVEIQAEQERIAQFKADNEYSLWSNEFFARHGRHLIGTMSTWFLLDIAFYSQNLTQKDIFPTMGLVHKDPDMNALQEVYETSRAMFVIALLGTFPGYWFTVAFIEKLGRFKIQLIGFFMMSFFMFVISVKYEAMKSNKYLFALLYGLTFFFANFGPNSTTFVLPAELFPTRARSTCHALSAASGKAGALVAAFGLQNFTQGEDVGKIKTAMKILAVTNFLGFCFSFLLTETKGRSLEEISGEDGREAEPAPSPNSRVVTRQQGPHSETFTKD	530

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0228	530	MobiDBLite	consensus disorder prediction	495	530	-	-
	Lele03g0228	530	Pfam	Sugar (and other) transporter	22	498	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele03g0228	530	CDD	MFS_PhT	22	490	-	-
	Lele03g0228	530	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	21	491	IPR020846	GO:0022857
	Lele03g0228	530	TIGRFAM	2A0109: phosphate:H+ symporter	6	500	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Lele03g0228	530	SUPERFAMILY	MFS general substrate transporter	8	498	IPR036259	-
	Lele03g0228	530	FunFam	Inorganic phosphate transporter 1-6	17	511	-	-
	Lele03g0228	530	Gene3D	MFS general substrate transporter like domains	17	512	IPR036259	-
	Lele03g0228	530	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	18	495	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0228	Lele-ChrLele03	1235671	1237263	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0228	2	500	Inorganic Solute Cotransporters	AT5G43360	63.548	0.0	663