Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0221 ATGGGTCAGCCATTGAATCCTGTGATTTGCTCTGACCAAAGACCAGCCAATCCCACTGCCTCTGCCTTTCATTCAACTCCATTGGTCAACCCCCCTCCTCTGTTTTCCCTTTATATCTCAACCTCCCCTGCTTTTTATCTTCTACCTTGCTCCTACTCTTCGGCTATCATCTCCCTGGCCAGAACCATGGGAGATTCGGCCTCACATAACCTCATAAACGAATTGCTCCAAGGAAGGGACCTTGCAATACACCTTCAAATGTGTCTGAACGCGCCCTCCACTTCCCCTGAATCCCCTGACATGTTGATCCGTCAAATCATTGCCACATTCGACAAGGCTCTCGCTCTTCTCAACTGCTCCGCCAAACACTCCGCCGGGCTTCTGGCCGATTCACCTCCTATCACTCCTCGCACTGAAGACCCCCACAAGGATTTCCAGCTCCAACCCCAGAACACGTCGGCAAGATGGACCAAACAGATTCGAATTAGCCCGGGGATGGCCGTCGAGTCCCTTCTGGACGATGGATTCAGCTGGAGGAAATATGGCCAGAAAGACATTCTTGGAGCCAAATTCCCCAGAGGATACTATAGATGCACCCATAGACACGCGCAAGGGTGCTTGGCCACAAAGCAAGTGCAGCGATCCGATGAAGACCCGATGGTCATGGAAGTCAATTACAGGGGAAACCACACCTGCAAGCTCGCCTCCAGCTCCAGCCCTGCTCCTCCATCACAAGAACAAGTCGTGAACCTACGTGCAGGCCTAAGGGTGCTGACGGAGAATTTAAATGCTTCTGACCAAACCTCTTTTGCTTCATCCCTATTGCCTTCGACTTCCAAAGTGAGACCCGACAACCCCGACTCCGTGTGTCCTGCCATCGAAAACAACGTTGTTCAAACCTTAAGTTCTCCTCCCTACATGTCCCCTGTCACCTCTTCAACAGCCCAAATTTCGGTGTCACCAAGAGGGGTTAGTAGCTTTGGATGGCCCCTGAATTTGCCTGCTCCTACCTCTGACGTCAACGACGCCATCTCTCCAGCGGGAGCTCCCACCGTCGCTTCCGAGTTTCCTTTATTTGACCACTTTGAATTTGAAGGCCACGGCTTCACATTTCATAACCCACGATACTTTTAA 1134 0.5159 MGQPLNPVICSDQRPANPTASAFHSTPLVNPPPLFSLYISTSPAFYLLPCSYSSAIISLARTMGDSASHNLINELLQGRDLAIHLQMCLNAPSTSPESPDMLIRQIIATFDKALALLNCSAKHSAGLLADSPPITPRTEDPHKDFQLQPQNTSARWTKQIRISPGMAVESLLDDGFSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQRSDEDPMVMEVNYRGNHTCKLASSSSPAPPSQEQVVNLRAGLRVLTENLNASDQTSFASSLLPSTSKVRPDNPDSVCPAIENNVVQTLSSPPYMSPVTSSTAQISVSPRGVSSFGWPLNLPAPTSDVNDAISPAGAPTVASEFPLFDHFEFEGHGFTFHNPRYF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0221 377 Gene3D WRKY domain 164 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0221 377 SUPERFAMILY WRKY DNA-binding domain 170 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0221 377 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 68 311 IPR044810 GO:0003700
Lele03g0221 377 Pfam WRKY DNA -binding domain 173 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0221 377 FunFam WRKY transcription factor 53 158 235 - -
Lele03g0221 377 ProSiteProfiles WRKY domain profile. 167 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0221 377 SMART WRKY_cls 172 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0221 Lele-ChrLele03 1203012 1204332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0221 70 245 WRKY Transcription Factor Family AT5G24110 44.134 1.33e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele03g0221 WRKY 5.6e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0215 01 1226882 1228208 Lele03g0221 03 1203012 1204332 hybridization
Lele02g0213 02 1181149 1182048 Lele03g0221 03 1203012 1204332 hybridization