Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0216 ATGAATATTCAGCAAGAGAAGTCTGTCAGGTTTCAGGATTGGAATTGGAACGTTGAGAACCAATATTCTGTTTCAAGTAACACGAGCCATCCAGGGAGAATCACTTCTTCGCTAAAGTCAGTTTCTATGAAATTTCAAAGAGGCTTCCAATCTGGTTCTGAGAGAATAAAGAGACTTAGAAATTCATTCAAATATTTTCCTTACAATAGCGTGCTGGCTAGAAGTTTTAGTTCTAGAAATAAAATACTTGACCCACAGGACCCATTCCTTCAAAAGTGGAACAAGATATTTGTATTATCATGTCTTATTGCTGTATCACTAGATCCTTTGTTCTTTTATGTCCCTGTCGTTGATGGTGAGAAGAAATGCCTTTCATTGGACCACAAGATGGAGATAACAGCTGCTGTTCTAAGATCTTTCTGTGATATTTTTTATATAATCCACATAATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTGTTTGGAAGAGGTGTTTTGGTTGAAGATGCTTTGGCCATAGCGAGGAGGTATCTGTCCTCGTACTTTTTGATTGACATTCTTGCTGTTCTTCCCCTCCCACAGGTGGTGATTTTGATTGTCATTCCAAAGTTAAGAGGAGGCTTTAAATCGCTGAACACGAAGAACTTTCTAAAATTTGTTGTTTTCTTCCAATATGTACCAAGGCTTTTACGTGTTGTTCCTTTATATAAAGAAATCACAAGGACCTCTGGCATTCTCACTGAAACCGCTTGGGCTGGAGCAGCCTTCAATCTTTTTCTTTACATGCTTGTCAGTCATGTTTTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACTTGCTGGCAACGAGCCTGCAGAAGAAATGCTACATGTCACAGGGCAGCTCTGTCTTGTGGTTCTCCAGGGTCAAGTGACATTGTAAACTACTTGAACTCCTCTTGCCCAATACAAGAGGCTAATACTACACTTTTTGATTTTGGAATATTCCTTGACGCACTTCAGTCTGGTATCGTGGAGTCAGGAGATTTCCCACAAAAGTTCTTTTACTGTTTTTGGTGGGGCCTTAGAAATCTGAGTTCTCTTGGTCAGAACCTGACAACAAGTACATACCTTTGGGAGATCATCTTTGCTGTTTTCATCTCCATCTCTGGTTTGGTTTTATTTTCATTTCTCATCGGAAATATGCAGACATATCTGCAGTCAACAACTACAAGATTGGAGGAGATGAGAGTCAAAAGAAGAGATGCAGAGCAGTGGATGTCTCATCGGTTGCTCCCTGATAGTCTGAGAGAGCGAGTCAGACGATATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAAGAAAACTTGATCCATAATCTTCCCAAGGATTTACGTAGGGACATTAAGCGCCATCTTTGCCTGGCTCTGCTGATGAGAGTGCCAATGTTTGAGAAAATGGATGAACAACTGTTGGATGCGATGTGTGACCGTCTGAAGCCAGTGCTTTACACAGAAGAAAGCTGCATTGTCCGGGAAGGAGATCCGGTGGACGAGATGGTGTTCATAATGCGAGGCAAACTCCTGACGGTGACAACCAATGGCGGAAGAACAGGCTTCTTTAACTCAGAGTTCCTCAAGAGCGGTGACTTCTGCGGAGAGGAGCTTCTGACGTGGGCATTGGATCCCCATTCCTCATCGAACCTTCCAATCTCAACCAGGACCGTACAAACCCTGGTAGAAGTTGAAGCCTTTGCCCTGAAAGCTGATGACTTGAAGTTTGTGGCGTCTCAGTTCAGGCGTCTTCACAGTAAGAAGCTTCGTCACGCTTTCAGGTTCTACTCCCAACAATGGCGGACGTGGGCGGCGTGCTTCATACAAGCAGGGTGGCGGAGATATAGCAAGAAGAAGCTGGAAGAGTCTCTGAGGGAAGAAGAGAATAGGCTGCAAGATGCGTTGGCAAAGGCAGGTGGGACCTCACCCAGCCTTGGTGCCACAATATATGCTTCCAGATTTGCTGCTAATGCACTACGAGCTTTACGACGTAATCGGTCGAGGAAGACACGGCTACCTGAAATATTTCCGCCCATGTTGCTCCAGAAGCCTGCAGAACCCGATTTTACCGCTGATGAGCAATCGTAA 2148 0.4376 MNIQQEKSVRFQDWNWNVENQYSVSSNTSHPGRITSSLKSVSMKFQRGFQSGSERIKRLRNSFKYFPYNSVLARSFSSRNKILDPQDPFLQKWNKIFVLSCLIAVSLDPLFFYVPVVDGEKKCLSLDHKMEITAAVLRSFCDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDALAIARRYLSSYFLIDILAVLPLPQVVILIVIPKLRGGFKSLNTKNFLKFVVFFQYVPRLLRVVPLYKEITRTSGILTETAWAGAAFNLFLYMLVSHVFGAFWYLFSIERETTCWQRACRRNATCHRAALSCGSPGSSDIVNYLNSSCPIQEANTTLFDFGIFLDALQSGIVESGDFPQKFFYCFWWGLRNLSSLGQNLTTSTYLWEIIFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERVRRYEQYKWQETRGVDEENLIHNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMVFIMRGKLLTVTTNGGRTGFFNSEFLKSGDFCGEELLTWALDPHSSSNLPISTRTVQTLVEVEAFALKADDLKFVASQFRRLHSKKLRHAFRFYSQQWRTWAACFIQAGWRRYSKKKLEESLREEENRLQDALAKAGGTSPSLGATIYASRFAANALRALRRNRSRKTRLPEIFPPMLLQKPAEPDFTADEQS 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0216 715 Gene3D Helix hairpin bin 411 476 - -
Lele03g0216 715 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 70 709 - -
Lele03g0216 715 Coils Coil 637 657 - -
Lele03g0216 715 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Lele03g0216 715 SMART cnmp_10 485 616 IPR000595 -
Lele03g0216 715 Gene3D - 96 409 - -
Lele03g0216 715 Pfam Ion transport protein 93 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele03g0216 715 CDD CAP_ED 485 616 IPR000595 -
Lele03g0216 715 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Lele03g0216 715 Gene3D Jelly Rolls 483 603 IPR014710 -
Lele03g0216 715 Pfam Cyclic nucleotide-binding domain 506 596 IPR000595 -
Lele03g0216 715 SUPERFAMILY cAMP-binding domain-like 414 609 IPR018490 -
Lele03g0216 715 ProSiteProfiles cAMP/cGMP binding motif profile. 485 569 IPR000595 -
Lele03g0216 715 SUPERFAMILY Voltage-gated potassium channels 84 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0216 Lele-ChrLele03 1158947 1163018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0216 1 713 Ion Channels AT5G53130 77.051 0.0 1121