Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0214 ATGTTGCTGATCACGCCATCGCTGGAACTTACCAGCAGTAGTGATGAGTGCAGAGAATCAAGATGTGGACGCCATGGCCCTCCAATTCGGTTTCCCTTCCAACGTAATCACATTGATCCCGATTCCTGTGGCTATCCTGGGTTTGATCTCACTTGTCATGAACATCACACGCTGCTTGAGATTCCTGCAGTTCCACTTCCAATTCAATTTAGGGTTAATCATATAAATTACAATTATCGGTATGTGTCCATATCTGACCCAGAAAATTGCCTTCCCAGGAAGCTTCTGAAGCTTAACCATACTTCAATTTCTTCTTTCCAATCTACATCGTCTCCACTTAAATCAGATCCATCCAACACCTATTAA 366 0.429 MLLITPSLELTSSSDECRESRCGRHGPPIRFPFQRNHIDPDSCGYPGFDLTCHEHHTLLEIPAVPLPIQFRVNHINYNYRYVSISDPENCLPRKLLKLNHTSISSFQSTSSPLKSDPSNTY 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0214 121 Pfam Wall-associated receptor kinase galacturonan-binding 17 86 IPR025287 GO:0030247
Lele03g0214 121 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0214 Lele-ChrLele03 1157384 1157749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0214 16 99 C3H Transcription Factor Family AT2G46495 38.824 1.13e-12 61.2