Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0212 ATGTCTAGTTCCCTTTCCTTTATACAACTTCCGACTCGCTCTTCTTGCGCTCTTCCCTCCATTAACAACCCTCAACTCAATGCACGCCCTTCAAATAAACTCGGGGGCAGAGTCACGCGACACTCAGCCACAAGGAAATCATCATGCTTGGTTGAGAAGAACATCTTCGGAAGCCGATTGCGTCCGTGCAGGGCGCCGGGATCGGAGAAACTGCACGTTTGGAAATCAGACGGTCCTGGGCGGTCGCCCAAGCTGATGGTGGTTGTTCGATCGGCATTGTCGGCGGTGCCGGATAAGCCAATGGGCCTCTATGATCCGGCTCTGGATAAGGACTCTTGCGGGGTTGGATTCGTCTCGGAATTATCGGGCGAGAGCAGTCGCAAAACGGTGACTGATGCTCTGGAGATGTTGGTGCGCATGTCACATAGAGGTGCCTGTGGTTGTGAAACCAACACTGGAGATGGAGCCGGCATTCTTGTGGCTCTTCCTCACGAATTTTACAGGAAGGTTGCTAAGGATGTGGGATTTGAGCTTCCACCGCCTGGACAATACGCTGTCGGCATGTTTTTCTTGCCTACGTCAGAAAGTCGTAGGGAAGAAAGCAAAAGAATATTTAAAGAGGTTGCAGAATCTCTTGGACACTCTGTTCTTGGTTGGCGTTCCGTGCCCACTGATAACTCAGGATTGGGCAAATCTGCCATACAGACAGAACCCGTCATTGAGCAAGTGTTCCTTACACATAGTCCTCGATCAAAACTTGATCTGGAAAGACAGATGTACATATTAAGAAAGGTCTCTATGGCAGCTATTGAATCTGCATTAAAACTCCTACTCGATGGCATTACAGATTTCTATATCTGTTCACTTTCATCAAGGACCGTTGTTTACAAGGGTCAGCTGACTCCTGCGCAATTGAAGGATTACTATTTTGCTGACCTTGGCGATGAAAGGTTTACGAGCTACATGGCCCTGATACACTCACGATTTTCTACCAACACATTCCCAAGCTGGGATCGTGCTCAGCCTATGCGTGTTTTGGGCCACAATGGAGAAATCAACACACTTAGAGGCAATGTAAACTGGATGAGGGCACGTGAGGGTCTACTCAAGTGCAAGGAACTTGGTTTGCCAGAGAGTGAGTTGAAGAAACTTTTGCCCATTGTGGATGCAAATTCATCAGATTCAGGAGCATTTGATGGTGTTCTTGAATTTTTGGTTCAATCTGGAAGAAGTCTTCCTGAAGCTGTCATGATGATGATTCCTGAAGCATGGCAAAATGACAAAAATATGGATCCTGAGCGTAAAGCTTTTTATGAGTACTTCTCAGCTCTCATGGAGCCATGGGATGGGCCTGCTCTTATCTCATTTACCGATGGCCACTATCTTGGAGCTACTTTGGATAGGAATGGTTTGCGACCTGGCCGTTTCTATGTCACCCACAGTGGAAGAGTCATAATGGCAAGTGAAGTTGGTGTTGTAGACATTCCTCCTGAAGATGTGTGTAGGAAAGGACGACTTAACCCCGGCATGATGCTTCTGGTTGATTTTGAAAAGCATGTTGTTGTAAATGATGATTCCTTGAAGGAACAATATTCATTGGCAAGGCCGTATGGAGAGTGGCTCAAGAGGCAGAAGATTGAACTCAAAGACATAGTTGACTCTGTACATGAATCCCAAAGAGCAGCATCAGCCATAGCAGGAGTGGTGCCAGCATCTAATGATGATGTGAACATGGAAAATATGGGAATTCATGGTTTATTAGCTCCATTGAGAGCATTTGGTTATACAATTGAATCCTTGGAAATGTTGTTGCTTCCCATGGCAAAAGATGGTGTTGAAGCTCTTGGATCAATGGGAAATGATACTCCATTAGCTATCATGTCTAATAGAGAGAAGCTGACCTTTGAATACTTCAAGCAATTGTTTGCCCAAGTTACAAACCCACCAATTGATCCTATCCGTGAGAAAGTAGTCACTTCCACGGAATGTATGATTGGTCCAGAAGGTGATCTGACAGAAACTTCAGAGGAACAATGCCACCGTCTTTCACTAAAAGGCCCCCTTTTATCCATTGAACAAATGGAAGCCGTTAAAAAGATGAATTATCGGGGTTGGCGAAGCAAAGTGATAGACATAACTTACTCTAAAGACTGTGGTAGTAGAGGATTGCAGGAAGCCTTGGACAGAATTTGTGAAGAAGCACACGATGCAATTACTAAGGGATATACAACACTTGTGCTATCTGATAGAGCTTTCTCAAGGAAACGCGTTGCTGTGAGCTCTCTTCTGGCTGTTGGTGCTGTCCATCAACACCTAGTCAAAACACTTGAACGTACTAGAGTTGCTTTAATAGTTGAATCTGCTGAGCCACGTGAAGTGCATCATTTCTGTACCCTTGTTGGCTTTGGTGCTGATGCTATTTGCCCATACCTGGCCTTGGAGGCAATCTGGCGACTACAACTTGATGGAAAGATCCCACCAAAGGCAAGTGGTGAATTCCACTCAAAGGATGAGCTAGTCAAGAAGTACTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCCAAGATGGGAATATCTACTTTGGCCTCTTACAAAGGCGCTCAGATCTTTGAAGCTCTAGGTCTTTCATCAGAAGTAATTGAAAAATGTTTTGCTGGCACTCCTAGTCGAGTTGAGGGTGCTACATTTGAGATGCTTGCTCGAGATGCTCTTCAACTGCATGAGTTGGCATTCCCTTCTCGTGTTTTCTCTCCAGGAAGTGCAGAAGCTCTTGCGCTGCCAAATCCTGGGGATTATCATTGGAGAAAAGGTGGTGAACTTCACCTGAATGATCCACTTGCTATCGCGAAACTTCAAGAGGCTTCCAGAACTAACAGCAAAGATGCATATAAACAGTATTCTAAGCTCATTCATGAACTAAATAAGGCTTGTAATTTGCGTGGTTTGCTTAAATTCAAAGAGTCAGCAGCGAAGATTCCCCTTGATGAAGTGGAACCAGCTAGCGAGATAGTTAAACGATTTTGCACTGGTGCCATGAGTTATGGGTCAATATCATTGGAGGCACACACAACACTCGCAATGGCTATGAATAAGATTGGTGGGAAATCCAACACAGGTGAGGGAGGTGAGCAACCATCTCGCATGGAGCCTCTTCCTGATGGCTCAATGAATCCAAAACGGAGTGCCATTAAGCAAGTTGCAAGTGGAAGATTCGGAGTTACAAGTTACTACCTTACTAATGCTGATGAACTGCAAATAAAGATGGCCCAGGGAGCAAAGCCAGGTGAGGGAGGTGAACTTCCAGGCCACAAAGTTGTAGGAGAGATTGCTGTCACCAGGAACTCAACTGCTGGGGTAGGACTTATCAGTCCTCCTCCCCATCATGATATTTACTCCATTGAAGACCTTGCACAGTTAATTCATGATCTTAAGAATGCCAACCCAGCTGCCAGAATTAGTGTGAAGTTAGTATCTGAAGTTGGAGTGGGCATTGTTGCTAGTGGAGTTGTTAAAGGGCATGCCGATCATGTCTTGATCTCGGGTCATGATGGGGGTACAGGAGCATCTAGATGGACTGGCATAAAAAATGCTGGTCTCCCTTGGGAGCTTGGCTTGGCTGAGACCCACCAAACTTTGGTCGCAAATGACTTACGTGGTCGCACAGTTCTCCAGACCGATGGGCAGCTAAAAACTGGCAGAGATGTTGCCATAGCTGCATTGCTTGGTGCTGAAGAGTTTGGTTTCAGCACAGCCCCACTCATTACTCTTGGTTGCATCATGATGCGGAAGTGCCACAAGAACACTTGTCCTGTTGGCATTGCCACTCAAGATCCAGTGCTTCGAGATAAGTTTGCAGGAGAACCTGAACATGTTATCAACTTTTTTTTCATGGTGGCAGAAGAGATGAGAGAAATCATGTCTCAGCTTGGATTTCATACCGTAAATGAGATGGTTGGCCGTTCAGATATGCTTGAAGTTGACAAAGAAGTAACTAAAAGCAATGAAAAGATGGAGAATATTGATCTCTCACTGTTGCTGAGACCCGCAGCTGAATTACGTCCAGACGCTGCTCAATATTGTGTGCAAAAACAAGATCACAGTTTGGACATGGCCTTGGACAATAAGCTTATAAGTCTGTCTAGTGCTGCTTTGGAAAAGGGTCTTACAGTGTACATTGAAACCCCAATCTGCAATGTAAATCGTGCCGTAGGAACCATGCTTAGCCATGAGGTGACTAAACGATACCACTTGGCTGGTCTTCCAACTGATACCATTCATATTAAATTTGCTGGAAGTGCAGGCCAGAGTTTTGGTGCATTCCTTTGTCCTGGCATCACTTTGGAACTTGAAGGGGATAGCAATGACTATATTGGCAAAGGATTATCTGGTGGCAAGATTGTGGTATACCCTCCCAAGGGAAGCAACTTTGATCCTAAGGAAAATATTGTAGTTGGCAATGTGGCATTGTATGGTGCAACAACTGGTCAGGCTTATTTCAATGGCATGGCAGCAGAAAGATTCTGTGTACGTAATTCTGGGGTTAAGGCTGTTGTGGAAGGTGTTGGTGATCATGGATGTGAATACATGACTGGTGGAACTGTTGTTGTGCTTGGGAAAACTGGTAGAAATTTCGCAGCAGGTATGAGCGGCGGTATTGCTTATGTGCTTGACGCTGATGAAAAATTCCGCTGTCGATGCAACCTTGAGCTTGTTGATCTAGACAAGGTCGAAGAAGAGGAGGATATTATGACTCTTAGAATGATGATACAGCAACATCAACGCCACACAAATAGTAAACTTGCCAAAGAAGTGCTTGACAATTTTGAGAATCTTGTTCCTAAATTTATCAAGGTGTTCCCCAGGGAGTATAAACGTGTACTTGCAAATATGAAGGCTGAGGCAGCCTCCAAAGAAACAGCAGAGGCTGTTAAAGATGCAGAAGATGAAGATGAAGCGCAACCGGTGGAAAAAGATGCCTTTGAAGAGCTTAAGAAACTGGCTGCTGCATCTTTGAATGAAAAACCAAGCCAGGCTAAAGCACCCAAGAGGCCTCTTCAAGTTGCTAATGCTGTCAAACATAGAGGTTTTGTTGCCTATGAGCGTGGGGGTGTTCAGTACCGTGACCCTAATATTCGAGTGAATGATTGGGAAGAAGTCATGGAGGAGGGGAAGCCTGGCCCACTTTTGAAGACGCAGGCAGCCCGTTGCATGGACTGTGGTACTCCTTTCTGTCATCAGGAAAATTCTGGATGTCCCCTTGGGAATAAAATACCTGAATTTAACGAGTTAGTATACCAAAATAGGTGGCGTGAAGCATTAGATCGCCTTCTTGAGACAAACAACTTTCCAGAGTTTACTGGTCGGGTGTGCCCAGCACCTTGTGAAGGTTCTTGTGTCTTGGGCATCATTGAGAATCCAGTATCTATAAAAAGTATTGAATGTGCTATAATAGACAAAGCTTTTGAGGAGGGTTGGATGGTGCCACGACCTCCACCCAAGAGAACTGGGAAAAGAGTTGCCGTTGTTGGAAGTGGACCGGCAGGCTTGGCCACAGCTGATCAACTAAATAAAATGGGTCATACAGTAACTTTATATGAGAGAGCTGATAGGATTGGAGGGCTTATGATGTATGGGGTGCCCAACATGAAAACTGACAAAGTGGATATAGTTCAGCGCCGGGTCAACCTTATGGCTGACGAGGGAGTCGAGTTTATGGTGAATGCCAATGTTGGAGTTGATCCTTTGTTCTCTCTGGATCGGCTTCGAGAAGAAAATGATGCTATTGTCTTAACTGTAGGAGCTACAAAGCCAAGGGATCTTCCGGTACCAGGACGGGATCTGTCAGGAGTTCATTTTGCCATGGAATTTCTTCATGCAAACACCAAAAGCTTGCTAGATAGTAATCTTGAGGATGGAAATTATATTTCTGCCAAGGGTAAGAAGGTTGTCGTCATTGGTGGGGGTGACACTGGCACAGATTGCATTGGGACATCCATTCGTCATGGATGTAGTAGCGTTGTGAATTTGGAACTGCTTCCTCAGCCACCACAAACTAGGGCCCCAGGCAACCCTTGGCCACAGTGGCCTCGCATATTCCGTGTAGACTATGGGCACCAGGAAGCTGCAACTAAATTTGGGAAAGATCCAAGATCTTATGAGGTTCTAACCAAGCGTTTTGTTGGGGATGAGAATGGAAACGTGAAAGGACTTGAAGTGATCCGGGTGCACTGGGAGAAGGATGAAACTGGCAAGTTTCAGTTTAAGGAAATTGAGGGTTCTGAGGAGATTATTGTGGCTGACTTAGTTTTGTTAGCCATGGGGTTCCTTGGCCCCGAGTCTACAATTGCTGACAAGTTGGGGCTGGAGAAAGACAACAGGTCAAACTTCAAGGCAGATTATGGCCGCTTCTCAACCAGCGTGAAAGGGGTCTTTGCAGCTGGGGATTGTCGCCGGGGCCAGTCCCTTGTGGTGTGGGCAATTTCAGAGGGACGACAAGCTGCTACTCAAGTTGATAAGTATCTCGTTGAAGAAGCGAGAGAACATAACGAGGAGGAACTTCTTACGAGGCAGGAAGACCTTACCAGGAAGCAGCAGGACAGCGGTAAACACACCGTAATGACATGA 6630 0.4555 MSSSLSFIQLPTRSSCALPSINNPQLNARPSNKLGGRVTRHSATRKSSCLVEKNIFGSRLRPCRAPGSEKLHVWKSDGPGRSPKLMVVVRSALSAVPDKPMGLYDPALDKDSCGVGFVSELSGESSRKTVTDALEMLVRMSHRGACGCETNTGDGAGILVALPHEFYRKVAKDVGFELPPPGQYAVGMFFLPTSESRREESKRIFKEVAESLGHSVLGWRSVPTDNSGLGKSAIQTEPVIEQVFLTHSPRSKLDLERQMYILRKVSMAAIESALKLLLDGITDFYICSLSSRTVVYKGQLTPAQLKDYYFADLGDERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMRAREGLLKCKELGLPESELKKLLPIVDANSSDSGAFDGVLEFLVQSGRSLPEAVMMMIPEAWQNDKNMDPERKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFEKHVVVNDDSLKEQYSLARPYGEWLKRQKIELKDIVDSVHESQRAASAIAGVVPASNDDVNMENMGIHGLLAPLRAFGYTIESLEMLLLPMAKDGVEALGSMGNDTPLAIMSNREKLTFEYFKQLFAQVTNPPIDPIREKVVTSTECMIGPEGDLTETSEEQCHRLSLKGPLLSIEQMEAVKKMNYRGWRSKVIDITYSKDCGSRGLQEALDRICEEAHDAITKGYTTLVLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALIVESAEPREVHHFCTLVGFGADAICPYLALEAIWRLQLDGKIPPKASGEFHSKDELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTPSRVEGATFEMLARDALQLHELAFPSRVFSPGSAEALALPNPGDYHWRKGGELHLNDPLAIAKLQEASRTNSKDAYKQYSKLIHELNKACNLRGLLKFKESAAKIPLDEVEPASEIVKRFCTGAMSYGSISLEAHTTLAMAMNKIGGKSNTGEGGEQPSRMEPLPDGSMNPKRSAIKQVASGRFGVTSYYLTNADELQIKMAQGAKPGEGGELPGHKVVGEIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARISVKLVSEVGVGIVASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIAALLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLRDKFAGEPEHVINFFFMVAEEMREIMSQLGFHTVNEMVGRSDMLEVDKEVTKSNEKMENIDLSLLLRPAAELRPDAAQYCVQKQDHSLDMALDNKLISLSSAALEKGLTVYIETPICNVNRAVGTMLSHEVTKRYHLAGLPTDTIHIKFAGSAGQSFGAFLCPGITLELEGDSNDYIGKGLSGGKIVVYPPKGSNFDPKENIVVGNVALYGATTGQAYFNGMAAERFCVRNSGVKAVVEGVGDHGCEYMTGGTVVVLGKTGRNFAAGMSGGIAYVLDADEKFRCRCNLELVDLDKVEEEEDIMTLRMMIQQHQRHTNSKLAKEVLDNFENLVPKFIKVFPREYKRVLANMKAEAASKETAEAVKDAEDEDEAQPVEKDAFEELKKLAAASLNEKPSQAKAPKRPLQVANAVKHRGFVAYERGGVQYRDPNIRVNDWEEVMEEGKPGPLLKTQAARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWREALDRLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPPKRTGKRVAVVGSGPAGLATADQLNKMGHTVTLYERADRIGGLMMYGVPNMKTDKVDIVQRRVNLMADEGVEFMVNANVGVDPLFSLDRLREENDAIVLTVGATKPRDLPVPGRDLSGVHFAMEFLHANTKSLLDSNLEDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSVVNLELLPQPPQTRAPGNPWPQWPRIFRVDYGHQEAATKFGKDPRSYEVLTKRFVGDENGNVKGLEVIRVHWEKDETGKFQFKEIEGSEEIIVADLVLLAMGFLGPESTIADKLGLEKDNRSNFKADYGRFSTSVKGVFAAGDCRRGQSLVVWAISEGRQAATQVDKYLVEEAREHNEEELLTRQEDLTRKQQDSGKHTVMT 2209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0212 2209 Gene3D Aldolase class I 930 1369 IPR013785 -
Lele03g0212 2209 Coils Coil 1631 1651 - -
Lele03g0212 2209 PRINTS Adrenodoxin reductase family signature 1984 1998 - -
Lele03g0212 2209 PRINTS Adrenodoxin reductase family signature 1840 1862 - -
Lele03g0212 2209 PRINTS Adrenodoxin reductase family signature 1863 1876 - -
Lele03g0212 2209 PRINTS Adrenodoxin reductase family signature 1906 1916 - -
Lele03g0212 2209 FunFam Glutamate synthase 1 [NADH] 569 928 - -
Lele03g0212 2209 MobiDBLite consensus disorder prediction 2186 2201 - -
Lele03g0212 2209 Pfam Conserved region in glutamate synthase 945 1313 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lele03g0212 2209 SUPERFAMILY alpha-helical ferredoxin 1692 1849 - -
Lele03g0212 2209 Gene3D - 1948 2109 IPR036188 -
Lele03g0212 2209 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 113 543 IPR029055 -
Lele03g0212 2209 CDD gltB_C 1374 1623 IPR002489 GO:0016491
Lele03g0212 2209 Gene3D - 1370 1641 IPR036485 GO:0016491
Lele03g0212 2209 FunFam Glutamate synthase [NADH], amyloplastic 930 1353 - -
Lele03g0212 2209 Gene3D - 1674 1838 IPR009051 GO:0051536
Lele03g0212 2209 TIGRFAM GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 1694 2180 IPR006005 GO:0006537|GO:0016639
Lele03g0212 2209 MobiDBLite consensus disorder prediction 1036 1057 - -
Lele03g0212 2209 Pfam Glutamine amidotransferases class-II 113 540 IPR017932 -
Lele03g0212 2209 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 113 517 IPR017932 -
Lele03g0212 2209 PANTHER GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN 175 2191 - -
Lele03g0212 2209 MobiDBLite consensus disorder prediction 2186 2209 - -
Lele03g0212 2209 FunFam Glutamate synthase, large subunit 1370 1641 - -
Lele03g0212 2209 Pfam Glutamate synthase central domain 590 878 IPR006982 GO:0006807|GO:0015930
Lele03g0212 2209 PIRSF GOGAT 43 2201 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Lele03g0212 2209 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1717 1826 IPR028261 -
Lele03g0212 2209 Gene3D - 1839 1947 - -
Lele03g0212 2209 SUPERFAMILY FAD/NAD(P)-binding domain 1836 2176 IPR036188 -
Lele03g0212 2209 FunFam Glutamate synthase [NADH], amyloplastic 1948 2109 - -
Lele03g0212 2209 Pfam GXGXG motif 1397 1583 IPR002489 GO:0016491
Lele03g0212 2209 Pfam Pyridine nucleotide-disulphide oxidoreductase 1839 2165 IPR023753 GO:0016491
Lele03g0212 2209 MobiDBLite consensus disorder prediction 21 40 - -
Lele03g0212 2209 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 113 552 IPR029055 -
Lele03g0212 2209 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1366 1630 IPR036485 GO:0016491
Lele03g0212 2209 CDD GltS 113 535 - -
Lele03g0212 2209 SUPERFAMILY FMN-linked oxidoreductases 584 1350 - -
Lele03g0212 2209 FunFam Glutamate synthase 1 [NADH] chloroplastic 113 552 - -
Lele03g0212 2209 FunFam Glutamate synthase [NADH], amyloplastic 1839 1947 - -
Lele03g0212 2209 CDD GltS_FMN 947 1326 IPR002932 GO:0006537|GO:0015930|GO:0016638
Lele03g0212 2209 Gene3D Aldolase class I 565 929 IPR013785 -
Lele03g0212 2209 FunFam Glutamate synthase 1 [NADH] chloroplastic 1675 1838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0212 Lele-ChrLele03 1140595 1151693 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0207 01 1170961 1182115 Lele03g0212 03 1140595 1151693 hybridization
Lele02g0207 02 1128913 1140044 Lele03g0212 03 1140595 1151693 hybridization