Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0209 ATGTATGCGGACACTGGTCTTTTGTTCCCGTATTTCCAGAATTCATCTCAAGAGCTTCACCAACTCGATGAGTACTGTCAAACCCATAAGCCCAATTCTCCAATGAGTGACCTTGTTCAGTCTTCTGCCATGTCGGAGTATTTTGATTTAGCAGCAGAAGGAGACCTGTTCAAAGCTCCTGAACCTATATTTGAAGAACCAGTCATGGACTTGGATCCCATGACGGCAGCCATTTCAATGATATCTTGTGGGGAAGACGTTGTCTCCTCACAGGGACTAAAACCCTCAGACTCCCTTCAACATGAACAACTCCTGAGCGAAGTTTTCTATGAATGCAAAAAAGACATGCTGGAAAAGGAAGCGATTGAGTCACCACTATCTGATATTCTGGAAATCAGGGTTCCTGCTCTGAATACAGATGAAAACCAAACTCAAGAAAGTAAACCATTTCCTGGCTTGCCATTACCAAAAAGTGTGAGTTCAGGATGTTTGAGCTCAATGGAGTGGATGCAAGGAACTTCAATGAAGCCTGCTTTTATTGATTTCCCAGGAATTAATTTCTGTGCAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATATGCACGCTATCCAATCTCCCTTAGAGAGTTCCTTTCCTATCAGTAACTGTACCAGCGAGCAACGCCGAGAAAAGCTCTCCAGATACAGGAGTAAGAAGACGAGGAGAAATTTCGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATTTGACGCCAGGAGGCAATGCTAG 849 0.4429 MYADTGLLFPYFQNSSQELHQLDEYCQTHKPNSPMSDLVQSSAMSEYFDLAAEGDLFKAPEPIFEEPVMDLDPMTAAISMISCGEDVVSSQGLKPSDSLQHEQLLSEVFYECKKDMLEKEAIESPLSDILEIRVPALNTDENQTQESKPFPGLPLPKSVSSGCLSSMEWMQGTSMKPAFIDFPGINFCADYGMRRAFSEGDIKALGSGNMHAIQSPLESSFPISNCTSEQRREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDARRQC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0209 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 125 274 IPR045281 GO:0009909
Lele03g0209 282 Pfam CCT motif 231 273 IPR010402 GO:0005515
Lele03g0209 282 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0209 Lele-ChrLele03 1115086 1117630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0209 214 272 C2C2-CO-like Transcription Factor Family AT3G21880 44.068 3.33e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele03g0209 CCT 5.4e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0203 01 1139818 1142035 Lele03g0209 03 1115086 1117630 hybridization
Lele02g0204 02 1103689 1107713 Lele03g0209 03 1115086 1117630 hybridization