Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0204 ATGGGCTGCTTTTGTTCAAAGAAAGCTAAGTCAGCAGGTTATGAGGAACCCACAGTTCTTGCTGCGGAGACACCTTGTGAGTATCATCAGACTGTCTCTGTGAGTGAAGTGGAGGCGCTACATGAACTCTATAAGAAGTTGAGCAACTCCATTATTGAAGATGGTGTTATTCACAAGGAAGAATTCCAGCTGGCACTCTTCAGGAATAAAAACAAGAGAAATCTGTTTGCCGACAGGGTTTTCGACTTATTTGATGTCAAGAGTAATGGGGTTATTGAATTTGGGGAATTTGTTCGATCATTGGGTGTTTTTCACCCAAATGCACCTATAGAAGACAAGATTACTTTTGCTTTTAGGTTGTATGATCTGACGCAGACGGGATACATTGAACGGGAGGAGCTAAAGGAGATGGTATTGGCGCTTCTACATGAGTCAGATCTTGTACTTTCAGATGATATTATCGAGACCATTGTGGATAAGACATTTAATGACGCTGATGCAAAAGGTGATGGAAGGATTGATCAAGAGGAGTGGAAGGCATTTGTCTCAAAGCATCCATCTTTGATGAAGAACATGACCCTTCCCTACTTAATGGATATAACCCTAGCGTTTCCGAGTTTTGTGGTAAGAATGGAAGTTGAAGACTCAGAGAATCACAACGAGGCGCTCAGCGCAGGAAGTCAATGTCGTCAAACAAAATGCTTCATGTTATGGAATACACTATTTCTTTTCATTATAAATTTCGTGACTGTTGGCCCGAGTAAGGGGTGGGAGGGTCATTTCAATACACGGCCTGCAAAGCCCAAGTGCTTGTTACATGGCTGCATGGCATTGGTCATAATGGTAAACAGAGGAACTGACAAAATCAGATCCTTTCCTTCTTTTTCTCAGTCCAATCTTATACATGTGAACAAGAAGAACAATTTCAAGCGTTCAAGATCTCTGCCTTTTAATATGCCGGTGACAGACTTTAGCGATGCACCTAATTTTGATGATAACAGCCTTTTCCCTGTTGAAGAGATTGTTCAATACCCACTGCCAGGATATGCCACACCATCTTCAATAAGTTTCAGCCCCGATGACAGTTCAATTGCATATTTATTTAGTCCTGATCACACGTTGAATAGGAAGGTTTTTTCATTTGATCTAAAGACATCTAAACAAGAACTGTTATTTAGTCCCCTTGATGGTGGGCTTGATGAGAGTAATATATCTCCAGAAGAAAAGTTAAGGAGGGAGAGGTCGAGAGAGCATGGATTAGGGGTGACACAATATGAATGGGTGAATACAAGTTACAAAAGGAAAGCTATCATGGTGCCTTTGCCTACTGGGATTTATATCCAGGATGTGTCCTCTTCAAAAGCAGATCTCAAGCTTCCAAGTATACCAGGTTCCCCAATTATTGATCCACGTCTATCCCCAGATGGGTCAATGATTGCCTACGTACAGGACTGTGAATTGTTTGTTCTGAATCTGTTGTCTAATGAATCAAAGCAGTTGACCCATGGTGCCAAGGAAAATGGTTTGACTCATGGCCTTGCCGAATATATAGCTCAGGAGGAGATGGACAGGAAAACTGGATATTGGTGGTCACTAGACAGTAAATATATAACTTTCTCTGAAGTTGATTCTTCTGAAATACCGCTTTTTAGAATTATGCACCAAGGCAAAAGCTCAGTTGGTTCAGAGGCACAGGAAGACCATCCGTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTTCGTCTTGGTGTTGTTTCAGTAGCTGGAGGATCCGCTACTTGGATGGATCTTGTCTGTGGGGGAACGAATCAACAAAATAATGAGGAAGAATATTTGGCAAGAGTCAATTGGATGCATGGAAACGTTCTCACAGCCCAGGTCTTGAACAGGCACCAAACAAAGATGGTGATCCTTAAATTTGATATTAGAACCGGTCAGAGGAAAACTTTATTGGTGGAAGAAAACAGCACATGGGTCAATTTACATGACTGTTTCACCCCTCTTGATAAAGGAGTTACCAAGTTTTCTGGGGGGTTTATTTGGGCTAGTGAAAAAACAGGATCTAGACACCTTTATCTTCATGATGCAAATGGGACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATAGCCGGTGTGAATGAGGCTACAGGTCTAGCATATTTCACCGGGACCTTAGATGGGCCTTTGGAGTCTAACTTATACCGCACTAAACTTGCCGTAGATGGAAGTCAACCACTGCATGCCCCTGTTAGACTTACTCATAGCAAGGGAAAGCACATTGTGGTCCTTGATCATCGTATGCAAAGTTTTGTTGATATTCATGATGCACTTGATTGTCCCCCCAGGGTGTCACTTTGCTCATTGGAAAATGGAAGCATAATCATGCCCTTGTATGAGCAGCCATTTACAGTTCCAAGATTCAAAAAGCTTCAACTCAAGCCACCAGAACTGGTGGAAATCCAGGCTAAAGATGGCATCCCGTTATATGGGGCCCTATATATGCCTGATGCATCAAGATTTGGACCTCCACCTTACAGAACTATGATCCATGTTTATGGGGGTCCAAGTATGCAGCTTGTTTCTAATTCTTGGATCAGTACAGTTGACATGAGAGCGCAATATTTGCGAAATCAAGGCATCTTAGTTTGGAAGTTGGACAATAGAGGAACGGCTAGACGGGGATTGAAGTTTGAAGGCTGCATAAAGCACTGTCTTGGTCAAATTGACGCAGATGATCAGCTAAGTGGAGCTGAATGGCTCGTCAAACAAGGGCTTGCAAAACCTGGCCACATTGGCTTGTACGGGTGGAGCTACGGCGGGTATATGTCTGCACTGACCCTGTCGAGATTTCCAGATTTCTTTAAGTGTGCTGTGGCCGGTGCCCCTGTGACATCATGGGATGGATATGACACATTTTACACAGAGAAGTACATGGGACTGCCGTCCGAGAATCAAACAGGCTATGAAACCGGTTCTGTGATGCACCATGTGCACAAGATGAAAGGGCGCTTGTTGCTTGTGCATGGGATGATTGACGAGAATGTGCATTTTAGACACACTGCAAGGCTTGTCAATGCACTTATCGCGGCTGGAAAACCTTATGAGCTAATGATTTTTCCAGACGAGCGCCACTTTCCCAGACGTCACAAAGACCGTGTTTATATGGAGGAGAGGATCTGGGACTTTATAGGCAAGAATCTGTAG 3219 0.4315 MGCFCSKKAKSAGYEEPTVLAAETPCEYHQTVSVSEVEALHELYKKLSNSIIEDGVIHKEEFQLALFRNKNKRNLFADRVFDLFDVKSNGVIEFGEFVRSLGVFHPNAPIEDKITFAFRLYDLTQTGYIEREELKEMVLALLHESDLVLSDDIIETIVDKTFNDADAKGDGRIDQEEWKAFVSKHPSLMKNMTLPYLMDITLAFPSFVVRMEVEDSENHNEALSAGSQCRQTKCFMLWNTLFLFIINFVTVGPSKGWEGHFNTRPAKPKCLLHGCMALVIMVNRGTDKIRSFPSFSQSNLIHVNKKNNFKRSRSLPFNMPVTDFSDAPNFDDNSLFPVEEIVQYPLPGYATPSSISFSPDDSSIAYLFSPDHTLNRKVFSFDLKTSKQELLFSPLDGGLDESNISPEEKLRRERSREHGLGVTQYEWVNTSYKRKAIMVPLPTGIYIQDVSSSKADLKLPSIPGSPIIDPRLSPDGSMIAYVQDCELFVLNLLSNESKQLTHGAKENGLTHGLAEYIAQEEMDRKTGYWWSLDSKYITFSEVDSSEIPLFRIMHQGKSSVGSEAQEDHPYPFAGASNVKVRLGVVSVAGGSATWMDLVCGGTNQQNNEEEYLARVNWMHGNVLTAQVLNRHQTKMVILKFDIRTGQRKTLLVEENSTWVNLHDCFTPLDKGVTKFSGGFIWASEKTGSRHLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLAYFTGTLDGPLESNLYRTKLAVDGSQPLHAPVRLTHSKGKHIVVLDHRMQSFVDIHDALDCPPRVSLCSLENGSIIMPLYEQPFTVPRFKKLQLKPPELVEIQAKDGIPLYGALYMPDASRFGPPPYRTMIHVYGGPSMQLVSNSWISTVDMRAQYLRNQGILVWKLDNRGTARRGLKFEGCIKHCLGQIDADDQLSGAEWLVKQGLAKPGHIGLYGWSYGGYMSALTLSRFPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQTGYETGSVMHHVHKMKGRLLLVHGMIDENVHFRHTARLVNALIAAGKPYELMIFPDERHFPRRHKDRVYMEERIWDFIGKNL 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0204 1072 Pfam Prolyl oligopeptidase family 873 1072 IPR001375 GO:0006508|GO:0008236
Lele03g0204 1072 PRINTS Recoverin family signature 127 145 - -
Lele03g0204 1072 PRINTS Recoverin family signature 80 101 - -
Lele03g0204 1072 ProSiteProfiles EF-hand calcium-binding domain profile. 72 107 IPR002048 GO:0005509
Lele03g0204 1072 Gene3D - 337 812 - -
Lele03g0204 1072 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 442 786 IPR002469 GO:0006508
Lele03g0204 1072 SUPERFAMILY alpha/beta-Hydrolases 819 1072 IPR029058 -
Lele03g0204 1072 SMART efh_1 157 185 IPR002048 GO:0005509
Lele03g0204 1072 SMART efh_1 76 104 IPR002048 GO:0005509
Lele03g0204 1072 SMART efh_1 113 141 IPR002048 GO:0005509
Lele03g0204 1072 Pfam EF-hand domain pair 112 181 IPR002048 GO:0005509
Lele03g0204 1072 ProSiteProfiles EF-hand calcium-binding domain profile. 153 188 IPR002048 GO:0005509
Lele03g0204 1072 FunFam calcineurin B-like protein 3 23 215 - -
Lele03g0204 1072 SUPERFAMILY EF-hand 30 207 IPR011992 -
Lele03g0204 1072 SUPERFAMILY DPP6 N-terminal domain-like 348 807 - -
Lele03g0204 1072 Gene3D alpha/beta hydrolase 821 1072 IPR029058 -
Lele03g0204 1072 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 338 1068 - -
Lele03g0204 1072 CDD EFh 113 183 IPR002048 GO:0005509
Lele03g0204 1072 ProSiteProfiles EF-hand calcium-binding domain profile. 109 144 IPR002048 GO:0005509
Lele03g0204 1072 Gene3D - 28 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0204 Lele-ChrLele03 1084292 1093308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0204 32 220 EF-hand Containing Proteins AT5G24270 73.016 7.19e-91 287
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0204 03 1084292 1093308 Lele03g0204 03 1084292 1093308 ECH
Lele01g0199 01 1113201 1119568 Lele03g0204 03 1084292 1093308 hybridization
Lele02g0199 02 1075004 1079596 Lele03g0204 03 1084292 1093308 hybridization