Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0200 ATGGAGATGGGGAAGAAAGGAGGCGGATGGTTCTCGTCAGTGAAGAAAGTTTTCAGATCGTCTTCTAATAAGGATTCGTCGGCACCGGCGAGGAAGAAGGATAACGAAAGAAGACAGCCTGAAGTGGCCGAGGTCGTGTCTTTCGAGCATTTTCCTGCGGAGAGTTCTCATGACGATTTCACCAATGAGAACAGTATAGCATCCACGCCTGTGGCGGAAGATAGAAATCATGCCATCGCGGTGGCGGCGGCCACAGCGGCGGCTGCAGAAGCAGCGGTCGCAGCGGCACAAGCAGCGGCCAGAGTTGTTCGATTGGCAGGTTACGGGCGCCACACAAATGAAGAAAGAGCAGCAACTCTCATTCAATCATACTACAGAGGCTACCTAGCTCGGCGGGCACTGTGCGCGTTGAAGGGATTGGTGAGGCTGCAGGCACTTGTGAGGGGGCATAATGTGCGGAAGCAAGCACAGATGACAATGCGGTGCATGCAAGCATTAGTTCGAGTGCAGGCCAGAGTAAGAGCTCGCAGATACCCGTTGAGCCAAGAGCAACTTCACAAGACAGAGGAGGAGAGAGAATTTGAGGAACAGCAAGTGGTAAGGCCTATGAGCCCCATGAATGGGTGGGACAATAGGCGTCACGGCGTCCACAAAATGCAGCAAAATGATGCCAGCAGGAAACACGACACAGTAATGAGGAGGGAGAGAGCTCTCGCTTACGCTCTCAACTCTCAGCAACAGCAGAGGCCGTTTCTACCTTCAGACCCCAATGACGATGATGTTGGAACCATGGGGTACAACAACGAGCGTGAAAAGGCCCCGTGGGGTTGGAACTGGTCGGATCGTTGGATGCCATCGCAACCGTACAATGTAAGGAACGTGGGGCCACGTGAGACCTCTTACATGACGCTTGCCACCACAACCACGACCACCACCGACGACATGTCTGAAAAGACGGTGGAGATGGACATGGTCGCTCCTTTAGGCTCAAGCAACGTCAGTGCTATGGGCCTAATGAACCAGGAGTTTCTGGATTTAAGCCCAATGTCCAACAGAAAACACCATCGACAATTCAGTTTAAATGTGCCCAGCTATATGGCTCCGACCCAGTCTGCGAAGGCCAAGGTGCAAGGTCAGGTGCCGATCAAGCCACGTGGCTCACCTGGGCCCCAGTGGAACTCGTCCACAAAGAAAGGGCCCGGTGGAGTTGGGTCGGTCTGTGATTCCTCAAGCTCCGGAGGAGGGACGTCGAGTTACCACTTCCCGAGGAGCCCCAGCCCAAAAATTAATGGGAGTCGGCGGCAGTCTAGGCGGATTGCGGGTAGCAGCCCGGATTATTCGGGCTTTGAGGATTGGGCACTTCCCCTCGGAGGCCATGGTTGGGCATGA 1389 0.5457 MEMGKKGGGWFSSVKKVFRSSSNKDSSAPARKKDNERRQPEVAEVVSFEHFPAESSHDDFTNENSIASTPVAEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHTNEERAATLIQSYYRGYLARRALCALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRYPLSQEQLHKTEEEREFEEQQVVRPMSPMNGWDNRRHGVHKMQQNDASRKHDTVMRRERALAYALNSQQQQRPFLPSDPNDDDVGTMGYNNEREKAPWGWNWSDRWMPSQPYNVRNVGPRETSYMTLATTTTTTTDDMSEKTVEMDMVAPLGSSNVSAMGLMNQEFLDLSPMSNRKHHRQFSLNVPSYMAPTQSAKAKVQGQVPIKPRGSPGPQWNSSTKKGPGGVGSVCDSSSSGGGTSSYHFPRSPSPKINGSRRQSRRIAGSSPDYSGFEDWALPLGGHGWA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0200 462 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 159 IPR027417 -
Lele03g0200 462 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Lele03g0200 462 MobiDBLite consensus disorder prediction 369 462 - -
Lele03g0200 462 PANTHER IQ-DOMAIN 5-RELATED 3 410 - -
Lele03g0200 462 SMART iq_5 113 135 IPR000048 GO:0005515
Lele03g0200 462 SMART iq_5 136 157 IPR000048 GO:0005515
Lele03g0200 462 Pfam IQ calmodulin-binding motif 141 156 IPR000048 GO:0005515
Lele03g0200 462 Pfam IQ calmodulin-binding motif 115 134 IPR000048 GO:0005515
Lele03g0200 462 MobiDBLite consensus disorder prediction 189 208 - -
Lele03g0200 462 MobiDBLite consensus disorder prediction 18 43 - -
Lele03g0200 462 Gene3D - 113 165 - -
Lele03g0200 462 MobiDBLite consensus disorder prediction 26 43 - -
Lele03g0200 462 MobiDBLite consensus disorder prediction 388 442 - -
Lele03g0200 462 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0200 Lele-ChrLele03 1058571 1061149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0200 3 434 IQD Protein Family AT3G49260 48.380 3.30e-97 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0200 03 1058571 1061149 Lele03g0200 03 1058571 1061149 ECH
Lele01g0195 01 1083442 1085875 Lele03g0200 03 1058571 1061149 hybridization
Lele02g0194 02 1051203 1053583 Lele03g0200 03 1058571 1061149 hybridization