Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0191 ATGGCACTGTCAAGCCCACAAATCCAAAGATTAGTCGTAACCATACTCCATGGCCATTCCACCTCCAATAATAGCGTCCGCAGAAACAGCGTCACCAATACGAGCAGAGGCCGCTGCTCCTCCGCCATAGCCATCGACACTCCGTCGTCTTTGTCTGAAGTGGCAGGCTTCCGATGGGGATCCATTGCTTTGCAGGGTCTTCGCGAAGAGATGGAAGATGGCATCGTTCTTCGTCCTGATGGCCCCCATGGCTTCTCTTTTGCCGCCGTGTTTGATGGGCATGGAGGATTTTCGTCCGTCGAGTTCCTCAGGGATGAACTGTACAAGGAGTGCCTTGCAGCTTTACAAGGGGGGTTAATATTGGATAGAAAAGATTTCCAAGCCATTAAAGCGGCATTACAGGAGGCATTTGTCAATGCTGACAAAAGTTTGTTAAAACGGCTTGAAATGAATGGAGATGAAGATGAATCTGGCGCTACCGCAACTGCAATGTTCGTCGGAGATGATATGCTTCTCATTTCACATTTAGGTGACTCATCTGTGGTTCTTAGCCGGTCTGGTAGAGCAGAAGAGCTGACTAGTCCCCACCGACCATATGGGAGCAATAAAGCCTCTCTTCAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCGTTTGGGGATATAAGATTCAAAACAAAGAAGAATGAGTATGGAAGAATGTTGAGAAAAGGGGTTGAGGAAGGAAGATGGTCAGAAAAATTTTCTTCTCGTGTACAGCTCAACGGAGACTTGGTCATTGCATGCCCTGATATTTATCAAGTACAGCTTGGCTCAGATGCAGAATTTATATTAGTGGCATCTGATGGCTTATGGGACTACATGAGCAGCTCAGAAGCAGTTTCTTTTGTGAGGAATCAACTTCGAGAGCATGGTAATATTCAGTTAGCTTGTGAAGCTCTCGCACAAGCAGCTCTGAATCGACGCACACAGGATAACATTAGCATCATAATTGCTGATTTAAGGCGGACAGACTGGCAGAAGTTGCCCCTTGAGCGGCAAAACGTGATTTATGAGACGATGCAAGCTTTAGCCACCATTGGAATAGTGTCACTTGGAATTTGGTTTTCATCGCAGATGTTATGA 1170 0.4581 MALSSPQIQRLVVTILHGHSTSNNSVRRNSVTNTSRGRCSSAIAIDTPSSLSEVAGFRWGSIALQGLREEMEDGIVLRPDGPHGFSFAAVFDGHGGFSSVEFLRDELYKECLAALQGGLILDRKDFQAIKAALQEAFVNADKSLLKRLEMNGDEDESGATATAMFVGDDMLLISHLGDSSVVLSRSGRAEELTSPHRPYGSNKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEYGRMLRKGVEEGRWSEKFSSRVQLNGDLVIACPDIYQVQLGSDAEFILVASDGLWDYMSSSEAVSFVRNQLREHGNIQLACEALAQAALNRRTQDNISIIIADLRRTDWQKLPLERQNVIYETMQALATIGIVSLGIWFSSQML 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0191 389 CDD PP2Cc 57 349 IPR001932 -
Lele03g0191 389 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Lele03g0191 389 ProSiteProfiles PPM-type phosphatase domain profile. 58 349 IPR001932 -
Lele03g0191 389 PANTHER PROTEIN PHOSPHATASE 2C 32 347 IPR015655 GO:0004722|GO:0006470
Lele03g0191 389 SUPERFAMILY PP2C-like 49 350 IPR036457 -
Lele03g0191 389 SMART PP2C_4 48 347 IPR001932 -
Lele03g0191 389 Pfam Protein phosphatase 2C 60 342 IPR001932 -
Lele03g0191 389 Gene3D - 57 356 IPR036457 -
Lele03g0191 389 FunFam Protein phosphatase 2C 57 57 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0191 Lele-ChrLele03 1018202 1021756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0191 1 326 PP2C-type Phosphatase Gene Family AT4G27800 61.702 6.08e-141 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0191 03 1018202 1021756 Lele03g0191 03 1018202 1021756 ECH
Lele01g0187 01 1042356 1045904 Lele03g0191 03 1018202 1021756 hybridization
Lele02g0187 02 1014882 1018432 Lele03g0191 03 1018202 1021756 hybridization