Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0180 ATGATTTCGGCTACCTCCATCTCTTCCATTTTCTTCGCCCTTCTCCTCTCCTTTCTAATCCTTCGTTTCTTCCGCAAAACTTCCCTAGTATATATTCTTCACATATGGTGGTTTACCCTTGAAAAACACCTCCATATTCACCAGTCCTTCAAAATCCCACTCTACAATGAGCATTACCAGGAAAATCAACTTTACCAGAAAACTCTCACGTACCTTAATTCACTGCCTTCCGTAGAAGACTCTGATTTCACCAAACTCTTCTCTGGTTCCAAGCCTGGTGAAATTTTCCTTCATCTAGATGCTAACCAGACAGTGGGAGACACTTTTCTCGGGGCGAGAGTTTCCTGGACAAAGGAAAAATCCGAAGGAGACGTTAATTCTGCACTGGTACTCAAAATCAGGAAGAAAGACAAACGCAGAATTTTCCGTCAGTACTTCCAGCACATCCTCACGGTTGCGGATGAAATCGAGCAGAAGACAAAAGAGATTAAGTTATGCGTGAACTCTGGAAGTGACGAGAACTCGCGGTGGCGATCGGTTCCATTCACCCACCCGGCGAGCTTCGACACGGTTGTGATGGATGCCGAGCTGAAGAACAAGGTCAAATCCGATCTCGAACTGTTTCTCAAGTCCAAGCAGTACTATAACCGGTTGGGTCGTGTTTGGAAACGAGGCTACCTTCTCTACGGGGCCTCCGGAACGGGAAAATCTAGTTTCATCGCAGCAATGGCAAGGTTCCTGTGTTACGACGTCTACGATATTGATATCTCCAAAGTTTCGGACGACTCCGATTTGAAGATGCTATTGCTGCAAACAACGAGTAAATCCGTGATTGTCATCGAAGGGCTTGATAGATTCCTTGCAGGGCAATCAAAAGCCGTGAGCCTATCAGGTATGTTAAACTTCATGGACGGAATTATATCGTGCTGTGGGGAGGAGCGGGTGATGGTGTTTACGGTGAACGAGAAAGATGAAATCGATCCAGCGGTGCTGAGGCCAGGAAGGATTGACGTTCACATACACTTCCCCTTGTGCAATTTCTCCACCTTCAAGGTTCTAGCCAGTAGTTATTTGGGGGTGAAGGATCACAAGCTTTTTCCTCAGGTGGAGGAGGTTTTTCAAGCGGGGGCCAGGATGAGCCCGGCCGAGATCGGTGAGATCATGATCTCGAACCGGAATTCACCCAGCCGGGCCTTGAAAACCGTCATCACGGCCCTCCAAATCAACGGCGGTGATGGGAGGAGGGGCCAGAGGTCGGGCGACGGCGGGTCATGTCGGAATAGCGGGGAATTGGGTCCACCTGACGGGGTTGCATGTCAGGAGAGTGTGACGATGAGGGAGTTCAGAAAGCTCTATGGGCTTTTGCGTATAGGGAGTAGGAGAAAAGGCGATTATTTTGGGCCCATGGAGAAAGAAGGCCCACGGATCCAAGCATAG 1437 0.4892 MISATSISSIFFALLLSFLILRFFRKTSLVYILHIWWFTLEKHLHIHQSFKIPLYNEHYQENQLYQKTLTYLNSLPSVEDSDFTKLFSGSKPGEIFLHLDANQTVGDTFLGARVSWTKEKSEGDVNSALVLKIRKKDKRRIFRQYFQHILTVADEIEQKTKEIKLCVNSGSDENSRWRSVPFTHPASFDTVVMDAELKNKVKSDLELFLKSKQYYNRLGRVWKRGYLLYGASGTGKSSFIAAMARFLCYDVYDIDISKVSDDSDLKMLLLQTTSKSVIVIEGLDRFLAGQSKAVSLSGMLNFMDGIISCCGEERVMVFTVNEKDEIDPAVLRPGRIDVHIHFPLCNFSTFKVLASSYLGVKDHKLFPQVEEVFQAGARMSPAEIGEIMISNRNSPSRALKTVITALQINGGDGRRGQRSGDGGSCRNSGELGPPDGVACQESVTMREFRKLYGLLRIGSRRKGDYFGPMEKEGPRIQA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0180 478 MobiDBLite consensus disorder prediction 410 436 - -
Lele03g0180 478 PANTHER BCS1 AAA-TYPE ATPASE 43 407 - -
Lele03g0180 478 CDD AAA 223 344 - -
Lele03g0180 478 Pfam ATPase family associated with various cellular activities (AAA) 227 344 IPR003959 GO:0005524|GO:0016887
Lele03g0180 478 Gene3D - 341 406 - -
Lele03g0180 478 Gene3D - 177 340 IPR027417 -
Lele03g0180 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 405 IPR027417 -
Lele03g0180 478 SMART AAA_5 222 346 IPR003593 -
Lele03g0180 478 Pfam Domain associated at C-terminal with AAA 38 117 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0180 Lele-ChrLele03 946328 947764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0180 218 342 Calmodulin-binding Proteins AT3G56690 27.338 2.30e-07 51.6