Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0168 ATGGGCCATTGCTGCAGCAAAAACCTTTCTGCCGTCGACAATGAAACCTCCCACCCTGACTCTCACCATAAACCTCCTCATTCCGCTGCATCGCCCCACTCTGCTGTCCATTCGGTCTCCGGAGCCACCGTTGCCACCCCTGCCCGCCATAGTTACACAAACTCCTACTCCGCCAGTACCTTTAACAGCCCCCTCCCACCGTCTCCGGGCGGGACTCCAGGTAGGAAATTTCGATGGCCTCTGCCGCCTCCGTCGCCGGTGAAGCCGATCATGGCGGCAATACTGAAACGGCAGGGGAAGGCTCAGCCTAAGGAGGGGTCCATACCGGAGGAGCAGGGTGAGAGGCCGCTGGATAAGAGCTTTGGGTTTGCCAAGAATATTGGCGCCAAGTATGAACTGGGGAAAGAAGTAGGTCGAGGACACTTTGGTCATACTCACCTGGCCAAAGCAAAGAAAGGAGTGCTTAAGGGGCAGTCTGTAGCCGTCAAAATAATATCCAAAGCTAAGATGACAACAGCCATAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAAGCCCTGTCTGGTCATATAAATGTAGTCAAGTTTCACGATGCATTCGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGTGAGGGAGGAGAACTACTTGATAGAATTCTCTCAAGAGGGGGAAGATACACAGAAGAAGATGCTAAAGCAATTCTTGTTCAAGCTCTAAACGTAATGGCCTATTGTCATCTTCAAGGAGTTGTTCACCGTGATCTAAAACCAGAGAATTTTCTCTTTGCCTCAAAAGATGACGATGCTCTGATGAAGGTCATTGACTTTGGTCTATCCGATTTCGTGAGGCCAGATCAACGCCTGAGTGAGGTTGTTGGCAGTGCCTACTATGTTGCCCCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGATTTATGGAGTATTGGGGTAATAACATACATATTATTATGTGGAAGTAGACCATTCTGGGCACGCTCTGAATCAGGAATCTTTCGCTCTGTGCTTAAAGCTAAACCTAACTTCGATGATTCGCCTTGGCCGTCCGTATCACTGGAGGCTAAAGACTTTGTAAAGAGACTTTTGAATAAGGATCTCAGGAAAAGGATGAGTGCTGCCCAAGCATTAACTCACCCGTGGTTGAGAAATGAAAATCAAGCCATTCCATTAGACATTTTAATCTACAAACAAGTCAAGTCATATTTACATGCCACGCCATTGAGACGCGCCGCACTCAAGGCTCTCTCTAAAGCATTGACAGAAGATGAGCTTATCTACCTTAGAGCACAGTTTAGCCTCTTGGAACCAAAAAATGGCTGCGTTTCCCTCGACAATTTTAGAGCGGCTCTTATGAAAAATGCAACTGATATGATGAAGGAAGCCAAGGTCCCGGACATTCTAAACTCGGTGAGACATCTTTGCTCTATGGATTCACCCGCCTCCGTAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATCAGTGTATACCAGCTCGAGGTTCATGAAGAGTGGGACAAAATCTCAAAAACAGCATTCGAATATTTCGAACAAGCAGGGAACAGGGTCATTTCAGTGGAGGAGTTGGCAGAGGAGATGAATCTGGGTGCTTCGTCTTACTCTTTACTGGGCAACTGGATCCGAGAATCCGACGGAAAATTGAGCTTTGTCGGATATACTAAGTTTATGCACGGCATCACTATTCGCAGTTCAAACACGAGACATCGACAGAACGCATGTTTGACAAATTTTGTGTAA 1794 0.4677 MGHCCSKNLSAVDNETSHPDSHHKPPHSAASPHSAVHSVSGATVATPARHSYTNSYSASTFNSPLPPSPGGTPGRKFRWPLPPPSPVKPIMAAILKRQGKAQPKEGSIPEEQGERPLDKSFGFAKNIGAKYELGKEVGRGHFGHTHLAKAKKGVLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHINVVKFHDAFEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKAILVQALNVMAYCHLQGVVHRDLKPENFLFASKDDDALMKVIDFGLSDFVRPDQRLSEVVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARSESGIFRSVLKAKPNFDDSPWPSVSLEAKDFVKRLLNKDLRKRMSAAQALTHPWLRNENQAIPLDILIYKQVKSYLHATPLRRAALKALSKALTEDELIYLRAQFSLLEPKNGCVSLDNFRAALMKNATDMMKEAKVPDILNSVRHLCSMDSPASVKMDFEEFCAAAISVYQLEVHEEWDKISKTAFEYFEQAGNRVISVEELAEEMNLGASSYSLLGNWIRESDGKLSFVGYTKFMHGITIRSSNTRHRQNACLTNFV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0168 597 SUPERFAMILY EF-hand 423 576 IPR011992 -
Lele03g0168 597 SUPERFAMILY Protein kinase-like (PK-like) 130 416 IPR011009 -
Lele03g0168 597 MobiDBLite consensus disorder prediction 54 82 - -
Lele03g0168 597 MobiDBLite consensus disorder prediction 66 82 - -
Lele03g0168 597 Gene3D - 410 574 - -
Lele03g0168 597 MobiDBLite consensus disorder prediction 103 118 - -
Lele03g0168 597 Pfam Protein kinase domain 131 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0168 597 PANTHER SERINE/THREONINE-PROTEIN KINASE 115 559 - -
Lele03g0168 597 ProSitePatterns Protein kinases ATP-binding region signature. 137 163 IPR017441 GO:0005524
Lele03g0168 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lele03g0168 597 Gene3D - 432 506 - -
Lele03g0168 597 FunFam CDPK-related kinase 1 124 219 - -
Lele03g0168 597 Gene3D Transferase(Phosphotransferase) domain 1 220 409 - -
Lele03g0168 597 CDD STKc_CAMK 130 392 - -
Lele03g0168 597 Gene3D Phosphorylase Kinase; domain 1 124 219 - -
Lele03g0168 597 FunFam CDPK-related kinase 1 429 506 - -
Lele03g0168 597 FunFam CDPK-related kinase 3 123 295 - -
Lele03g0168 597 MobiDBLite consensus disorder prediction 97 118 - -
Lele03g0168 597 MobiDBLite consensus disorder prediction 1 42 - -
Lele03g0168 597 ProSiteProfiles Protein kinase domain profile. 131 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0168 597 SMART serkin_6 131 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele03g0168 597 FunFam Calcium-dependent protein kinase SK5 303 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0168 Lele-ChrLele03 899017 902007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0168 46 582 EF-hand Containing Proteins AT3G50530 58.333 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele03g0168 Pkinase 7.6e-69 CL0016