Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0165 ATGATCGACATCCGATTCCAAAGGCCACAAAACAGGGGACATCTTGCTTACCTGAAAAGCTGGGTCTATCTAAGAGCTGAGTGTCTCTATATGGGTGAATTTGGCGTTTCGGACAAGGAAGATGCAAAAAATAGCAGCAATGGTGGTGTTGGGTTGGGTATGAAGGTGCAGAGGCAGAACCTTGAAGCATTCCCTAGTAAGAGCATGATGATGATGGTTCCCCCTCCTCATAATCATCACGATCCTCCACTATATGGTCCCTCCTTTGCTGGTGCTGCTGGTGATGGTGATGGTCCTACAACTTGTAAGTCCCTGACTCATTATACAAACCATTTTGTTAATGCTGCTTCAGCTTCTGGTGCCGCACTTGTTAGACCCTTGCAGCCTTTTCACGTTTCTGCTTCAACAGCCTTCAAATCCTCAGGTGGGGTGATGGCGGCTTCACTGGGATTTCATTTCACAAAAGCACAATGGAAGGAGCTTGAAAGACAAGCTATGGTATACAAATACATGATGGCTTCTATTCCTGTTCCTCCTCATCTGCTTATCCCCGTGCCTGCTTCTCGCTCTCCCATGGATACCGGTTTCAATCCAAGGATCACAAGCAGTAGCAATGCAGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCCAGAGACGTAGCCCCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCCCCACCAACAATAATCAGCAAATCAACAGAGCTAGCCAAGATTATCCTTCTTTATCTACTCCTACCATGACTACCAGTCAGCCATACTTTGAATCTTCCCTTGCTTCTGTTCCAAGAGGGGCGGACTGGATGCTGAAAGGTGACCCTAATCCCATGGATCCACAATGGCATCCTCTGATACAGAACAAACTCAGATTGAATACGGGAAGTTCCTGTAACAAGGACGCCCCGATTTCAATCACTCGTTCCAATGGCCATCTGTACACCAATTCCTATGATGTTTTCAGTTCTGAACGAGACCAACACGACAAGCAATCCCCTTTGTACCTCAATCCTCGGTCTGTAAAACCAAGAGCTTCCATTGATGCTTGGTCGAGGGCAGAAACCAATGCCAACCAAAGGAGCTCTGTGGGATCAAATAACAGTTTATCGCTTTCTTCTCTTGCCGTGTCCGTGGGTGGTGGTGTGGAGGAACACATGGGTCCTATTTATGTGGGCTTGGGCGTAATGGATCCCCCTGCGAATTGGGCTGGTTGTTCAACTCCTGGGGGCCCACTAGCGGAAGTGCTGAGGCCCAGGAAGGTGTTGACCACTACAAATGAGAGCCCTATGGCAACAATGGTGTCATCTCCATCTGGGGTTCTTCAGAAGACGCTTGCTTCATTCTCTGATAGTAGCAGCCCGAGGACGAGGGTTGGGTCTTCCAGGGCCAGTTCTGATATGACCTTCCTGTGCTTTAATCACGCCAAATTACCTTCTTAA 1515 0.4818 MIDIRFQRPQNRGHLAYLKSWVYLRAECLYMGEFGVSDKEDAKNSSNGGVGLGMKVQRQNLEAFPSKSMMMMVPPPHNHHDPPLYGPSFAGAAGDGDGPTTCKSLTHYTNHFVNAASASGAALVRPLQPFHVSASTAFKSSGGVMAASLGFHFTKAQWKELERQAMVYKYMMASIPVPPHLLIPVPASRSPMDTGFNPRITSSSNAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQAPTNNNQQINRASQDYPSLSTPTMTTSQPYFESSLASVPRGADWMLKGDPNPMDPQWHPLIQNKLRLNTGSSCNKDAPISITRSNGHLYTNSYDVFSSERDQHDKQSPLYLNPRSVKPRASIDAWSRAETNANQRSSVGSNNSLSLSSLAVSVGGGVEEHMGPIYVGLGVMDPPANWAGCSTPGGPLAEVLRPRKVLTTTNESPMATMVSSPSGVLQKTLASFSDSSSPRTRVGSSRASSDMTFLCFNHAKLPS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0165 504 MobiDBLite consensus disorder prediction 195 215 - -
Lele03g0165 504 Pfam QLQ 152 185 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele03g0165 504 PANTHER GROWTH-REGULATING FACTOR 5 131 397 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele03g0165 504 MobiDBLite consensus disorder prediction 195 209 - -
Lele03g0165 504 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele03g0165 504 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele03g0165 504 ProSiteProfiles WRC domain profile. 205 249 IPR014977 -
Lele03g0165 504 Pfam WRC 206 248 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0165 Lele-ChrLele03 881250 884527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0165 143 478 GRF Transcription Factor Family AT5G53660 35.674 1.43e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele03g0165 WRC 2.4e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0165 03 881250 884527 Lele04g0161 04 901616 904290 ECH
Lele03g0165 03 881250 884527 Lele03g0165 03 881250 884527 ECH
Lele01g0157 01 904425 906805 Lele03g0165 03 881250 884527 hybridization
Lele02g0162 02 895840 898674 Lele03g0165 03 881250 884527 hybridization