Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0147 ATGGGTTCGATTACGCAAATTAAGTGTTCTGTTGCTAATAGAACATTGACTTCTAGCTTTGTGGCCTCACCTACATCCAAACCATACTCCCCTCGCTTGACCAGGAAACAAGGGTTTTCATCTTCATTATATAGTCGTCCCAGTTTATCAGAAATGAACAAAGAGAGGATGGCAAACCGTGAGAAAGTTTATACATTCTTGCGGGGGATTGGAATTGTTCCTGATGAGCTTGATGGCCTGGAACTTCCAGTGACAGTCGAAGTTATGAGGGAGCGAGTAGATTTCCTTCACAATTTAGGGCTTACAATTGAAGACATCAACAATTATCCACTAGTTCTTGGCTGCAGTATCCAAAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGGAAATCTACATTAACACAGTTCTTGCGGAGATACCCACAAGTTCTTCATGCTAGTGTTGTTATTGACCTCGAGCCAGTGGTCAAGTATCTTCAGGGGATGGATATCAAGCCCAATGATATTCCCCGGGTTCTGGAGACTTATCCAGAAGTGTTAGGATTCAAGCTTGAAGGAACCATGAGCACGTCAGTTGCTTATTTGGTTGGCATTGGTGTTGGAAGAAGAGAAATTGGAGGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTGGAGTATCTGGAAAGCTTAGGAATTCCAAGATTAGCCATTGCAAGAATAATAGATAAACGACCTTATATTCTTGGCTTTGGAGTGGACGAGAAGGTGAAGCCAAATGTGGAAGCTCTTGAAGATTTCAATATTAGAACGGCATATCTGCCCTCTGTAATTGCACAGTATCCTGATATCATGGGAATGGATTTGAAGCCAAAGCTTGAGAATCAAAGTAATTTACTTAAATCTTTAGTTGATTTGGACTCTGAAGATTTCGGTAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAGTGCGCCTATGTTAAAGCATGTTAATTTTCTCAAGGATTGTGGGTTTTCCTTGCAACAAATGAAGAAGATGATTGTTAGATGCCCTCAACTTCTCGCTTTAAACATTGAGATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGACGGGGAGGCCTTTAGAAGACTTGGTTGATTTCCCAGCCTTCTTTACATACGATCTGGAGTCAATTGTAAAACCAAGGCATAAGATGATTTCCAAGAAGGGAGTGAAATGTTCCCTTGCATGGATGCTTAATTGCTCAGATGACAAGTTTGAACAACGAATGGATTATGACACTATTGACGTGGAGGAAATGGAAATGGGACCATCATTTGATATGAATTCACTGATGGAACCAAGGAATGACGAGTCAGCATCTGATTACGATGACAGTGATGATGATGATGATGATGAGTAG 1440 0.4069 MGSITQIKCSVANRTLTSSFVASPTSKPYSPRLTRKQGFSSSLYSRPSLSEMNKERMANREKVYTFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSIQKNMIPVLDYLGKLGVRKSTLTQFLRRYPQVLHASVVIDLEPVVKYLQGMDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARIIDKRPYILGFGVDEKVKPNVEALEDFNIRTAYLPSVIAQYPDIMGMDLKPKLENQSNLLKSLVDLDSEDFGRVVEKMPQVISLSSAPMLKHVNFLKDCGFSLQQMKKMIVRCPQLLALNIEIMKLSFDYFQKETGRPLEDLVDFPAFFTYDLESIVKPRHKMISKKGVKCSLAWMLNCSDDKFEQRMDYDTIDVEEMEMGPSFDMNSLMEPRNDESASDYDDSDDDDDDE 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0147 479 FunFam Transcription termination factor mterf4, chloroplastic 89 226 - -
Lele03g0147 479 FunFam Transcription termination factor MTERF4, chloroplastic 227 441 - -
Lele03g0147 479 Gene3D Transcription termination factor 3, mitochondrial 229 442 IPR038538 -
Lele03g0147 479 Gene3D Transcription termination factor 3, mitochondrial 90 228 IPR038538 -
Lele03g0147 479 PANTHER CGI-12 PROTEIN-RELATED 124 435 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 Pfam mTERF 125 433 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 355 386 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 387 418 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 40 73 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 283 315 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 320 350 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Lele03g0147 479 MobiDBLite consensus disorder prediction 449 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0147 Lele-ChrLele03 784885 786324 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele03g0147 mTERF 5.9e-107 No_clan