Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0122 ATGGGACGCCAGCACGACTCACGAGAGCCCTTTGCCATACAATCAGCAAAACGTATCTTTATCCTCCAGCTTGCCGTTAACCTCCCAGTTCCCTTCACGAAGGTTCAGAGGGACATGGCACTAACGAGAGTTGCAGTTCGCATGAAGGTTCATATGCAGTTTGAGAAACCCCCGATAAAGGGTTTTCAGTCCGCGTACATGGAATTAAAATGGATTCGAAGAAGAAGCACCCAAACCTCACAATTTGATAGAAAGCTGCTAAGCCCAGCAATTAGGCCGCCTTTTCCGATTTACATTTCCACGGACCCAAATCACATTGATCTTCACCAGCTTCAACAACTCTATGCTGATTGCAACCACTCATGCTATAAGTTCCCCAATTACGTGGACTCCCATGGCCGCTTCGAATCCGTCGATATCCATAAGCTCCGCGTTGCTCTGTCTCACAGCGCTGTGCTTGTCTCCGTCTTCTGCAAACCACACGATATTATTGATGATGATGGGGATGGAGATTCCACTTCCTCCGCGGATACGTCGAAGAAGATTGTTGGTGTGGCGGATTTCTTGCAGAGCGTGACGCCGGTTTCTCCCTTCGATGGTCAGTTGGTGGGCTTCGGCCGTGCCATTTCTGATTGCGGCCTTACCGCTTCAATCTACGATGTGATGGTCATTCCTTCGCTGCGGAGATTGGGAATTGGCCGAATGATAGTTAAAAAAATTGTGAGGATGCTCACAAATAGAGACATTTATGACATTGCAGCTCTTTGTACAGAGAATGAGAGGTTATTCTTTAAGGCTTGTGGATTTGGAGGTGACATTTTAGGCTCTACTACCATGATGTATACGAAGGCTCCATCATCAATAACCCAGCAAGGTGAATGCGACGTTAGACTCATAGGCCGAAAGCTATTATCGGTTCCACCTCTTAAAGGACCCCTCAAATCTTCGAGGGCAATCACATTCGTACAAATTCTTTTACATGTGACCAATTTAATATTCCCATTCACAATGCCTTCTATGGGGAAAATTTGGGTTGAGGTAAGCCTCGTATCTGCTCATGGGCTCGGGCATTCACCGTCGCTTTGGAAGCGTCAATGCTTTGCTGTTGGATGGATTGATCCTAACTGCAAATACTGCACCAAGGTTGATGCTTCTGGGAGTGAAAATCCTGTTTGGAAAACCAAGTTTGCCATTCTGGTTGACGACTGTGAGTCAGAGATCAACATCCAAGATCTAGTGTTGAATGTGGAAGTTCATAGTATAGACCCCATATTCCTCACTGAAAAGATTCATGGCTCTGTGCCTGTTATCATCAAAGAGTTTCTAGCGAAGAAGGTTCCAAATTCTGAGGTTTCTTTAAGGCCGGGAAATGAGGAAATTCGGAGCTACCAATTGCGAAAGAAGGATTCCGACAAGCCACGGGGCTTCATTGATATTTCAATCCGTATTTTGGAGGAAAAGGAAGAGCAAAATTCGAACCCAGCTGTGAATTGGAGAGGAAAGAAGAGAGGAAACCTGACTAGAGAAAATGGATCAGGGGAGAAGTACTGGCAGCATTTGCCTCTGGCTTCACCCCCCCACCAAAAGAATGAAGCACGGACAACCATTCCCTGCTCTTATCCGATGCAATTCCCTAAAAACGACTCTGACAATGAGCTGGATGAGGGGAGTCCCAGTTACGAACGACGACGTAGAACTCCTTCTCCGCCACCCCCACCTTCAAATGTTGGTTATATTCCCACTTTTCTACCCAAAAATGATTCTTTGCCATCACCATCATCTGGGCCAAACCCTCCAGGGTTGGCTATGGGAGCTCTCATTTTTGGGGATGACTTCATGTCTGGATTTGATGTTCCTCCCTGA 1863 0.4643 MGRQHDSREPFAIQSAKRIFILQLAVNLPVPFTKVQRDMALTRVAVRMKVHMQFEKPPIKGFQSAYMELKWIRRRSTQTSQFDRKLLSPAIRPPFPIYISTDPNHIDLHQLQQLYADCNHSCYKFPNYVDSHGRFESVDIHKLRVALSHSAVLVSVFCKPHDIIDDDGDGDSTSSADTSKKIVGVADFLQSVTPVSPFDGQLVGFGRAISDCGLTASIYDVMVIPSLRRLGIGRMIVKKIVRMLTNRDIYDIAALCTENERLFFKACGFGGDILGSTTMMYTKAPSSITQQGECDVRLIGRKLLSVPPLKGPLKSSRAITFVQILLHVTNLIFPFTMPSMGKIWVEVSLVSAHGLGHSPSLWKRQCFAVGWIDPNCKYCTKVDASGSENPVWKTKFAILVDDCESEINIQDLVLNVEVHSIDPIFLTEKIHGSVPVIIKEFLAKKVPNSEVSLRPGNEEIRSYQLRKKDSDKPRGFIDISIRILEEKEEQNSNPAVNWRGKKRGNLTRENGSGEKYWQHLPLASPPHQKNEARTTIPCSYPMQFPKNDSDNELDEGSPSYERRRRTPSPPPPPSNVGYIPTFLPKNDSLPSPSSGPNPPGLAMGALIFGDDFMSGFDVPP 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0122 620 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 198 269 IPR016181 -
Lele03g0122 620 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 98 280 IPR039143 GO:0004343|GO:0006048
Lele03g0122 620 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 151 285 IPR000182 GO:0016747
Lele03g0122 620 Gene3D - 95 272 - -
Lele03g0122 620 MobiDBLite consensus disorder prediction 528 546 - -
Lele03g0122 620 MobiDBLite consensus disorder prediction 488 602 - -
Lele03g0122 620 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 340 486 IPR035892 -
Lele03g0122 620 CDD NAT_SF 199 249 - -
Lele03g0122 620 ProSiteProfiles C2 domain profile. 327 451 IPR000008 -
Lele03g0122 620 MobiDBLite consensus disorder prediction 564 578 - -
Lele03g0122 620 MobiDBLite consensus disorder prediction 548 562 - -
Lele03g0122 620 Pfam Acetyltransferase (GNAT) family 197 269 IPR000182 GO:0016747
Lele03g0122 620 Gene3D C2 domain 344 510 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0122 Lele-ChrLele03 687304 691017 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele03g0122 Acetyltransf_1 1.3e-06 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0123 01 717007 721266 Lele03g0122 03 687304 691017 hybridization