Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0117 ATGTGGACGCGAATGCATCAGATCAGCTCTCATTTTATTTCCTTACAATATGCTTCAATAATTTCCTTGAGTATTCAGGAAATTCCTAAAATGAGGACTATTCCCACTCCTATATATGCTACGCATAAGCTTAGCCCACCATTTATCAAAGCAAAAGTGATAAAGTTTAATAAGTTGTTGAAGGCAGAGAAAGTCATGGCTGTAAGAGATGATGGGGCTGACCTTAGAGGAACTATTCCCCTGAAGCAGCACTTTGTGCTGGTACATGGCGTAGGAGGAGGAAGCTGGTGCTGGTACAAAATCCGGTGTCTAATGGAGAAATCCGACTACAAGGTTTCCTGTGTAAACCTCAAAGGTTCTGGGATTGATCGAACTGAAGCTGATTCTGTTCTTTCTTTTGATGATTACAACAAACCTCTTATGGATCTCATGTCTGCTCTGCCTGAAAACGAAAAGGTGATACTTGTGGGACATAGCGCAGGAGGGTTGAGCATTACACAAGCAAGTCACAAGTTTCCCAAGAAGATTCGTTTGGCAGTCTATGTAGCAGCAACCATGCTCAAGTTGGGATTCTGGACAGATGAAGATCACAAAGACGGGGAACCCGACTTATCTGAGTTTGGGGATGTGTTCGAGCTTGGATTTGGACAGGGACAGGATAAGCCTCCAACCAGTGTTTTGGTCAAGAAAGAATTTCAACGCAAAATCATCTACCCTTTGAGCCCTTATGAGGATTCGACGTTAGCTGAGATGCTGTTGAGGCCAGGGCCAGTTCAGGCATTGACGAGCGCGCGATTCACGGAGGAAGAAGCGGATGAAGTGGAGAAGGTACCGCGAGTGTTCATAAAGACAATGCAAGACAAGGTGTTGAAGCCAGAGCAACAAGAGGCCATGATCAAGAGATGGCCGCCATCTATTGTGTACGAACTGGACACTGACCATAGCCCCTTCTTCTCCGCTCCTTTCCTCCTCTTGGGCTTCCTTGTTAAAGCTGCTGCTTTTGACCTTGCATCTGCCTGCGCCTAG 1026 0.4591 MWTRMHQISSHFISLQYASIISLSIQEIPKMRTIPTPIYATHKLSPPFIKAKVIKFNKLLKAEKVMAVRDDGADLRGTIPLKQHFVLVHGVGGGSWCWYKIRCLMEKSDYKVSCVNLKGSGIDRTEADSVLSFDDYNKPLMDLMSALPENEKVILVGHSAGGLSITQASHKFPKKIRLAVYVAATMLKLGFWTDEDHKDGEPDLSEFGDVFELGFGQGQDKPPTSVLVKKEFQRKIIYPLSPYEDSTLAEMLLRPGPVQALTSARFTEEEADEVEKVPRVFIKTMQDKVLKPEQQEAMIKRWPPSIVYELDTDHSPFFSAPFLLLGFLVKAAAFDLASACA 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0117 341 PANTHER METHYLESTERASE FAMILY MEMBER 82 332 IPR045889 -
Lele03g0117 341 SUPERFAMILY alpha/beta-Hydrolases 82 323 IPR029058 -
Lele03g0117 341 Gene3D alpha/beta hydrolase 81 333 IPR029058 -
Lele03g0117 341 FunFam putative methylesterase 11, chloroplastic 80 334 - -
Lele03g0117 341 Pfam Alpha/beta hydrolase family 85 321 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0117 Lele-ChrLele03 659997 664027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0117 82 184 Miscellaneous Gene Families AT5G10300 46.602 1.90e-27 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1933 26 22887406 22892519 Lele03g0117 03 659997 664027 CCT
Lele27g0185 27 1395623 1400001 Lele03g0117 03 659997 664027 CCT
Lele28g1941 28 22689770 22705656 Lele03g0117 03 659997 664027 CCT
Lele01g0117 01 687834 694262 Lele03g0117 03 659997 664027 hybridization
Lele02g0114 02 673198 675932 Lele03g0117 03 659997 664027 hybridization