Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0112 ATGGGTACTCTTTGCCCCGATCATGTGTCTGCAGACAAGGAGAGTATCATCAGAGAGCTCGTTGAGGGCAAGGAGTGCGCTTCCCAGCTCAAGCTTTTGTTTCAGAAACCTTCCGGGCCTGGCGAGACTCCCTCTGCCGACCAACTCATCTCCAAAATTTTGAGATCCTTCACCCAAAGTATTTCCGTTTTGACTTCCTCCGAAGCCGGCGGCGAGGTTGGTCAGATTTCGGCGATTTCCGGTCTGAGTGGGTCTCCTCTCGGAACTTCTTCCTGCAATGGCCGGAGGCCGGACGAATCCGGCCAGAGCAGGAAGAGATCACAGCCGCCGCCCACAAAGGATCGGAGAGGCTGCTACAAAAGAAGGAAGACTGGAGATACACGGACCAAAATCTCGCACACTTTTGAGGATGATCATGCATGGAGAAAATATGGACAGAAGGAAATCCTTAATTCTAAATTCCCCAGGAGTTACTTTAGATGCACTCGGAAGCACGATCAAGGTTGCAAGGCGATCAAGCAGGTTCAGCGCATACAGGAGAATCCAGAAATGTTCCTAACGACGTACATTGGATTTCACACGTGCAAAGACAACTTAAAGGCTCCCGAAATGGTGGTCACAGATTCTGGTAATTGGGAATCATATCTGGAACCGCCTGAATCTAAGAAGACACCGAACAAAGATCAAAAGGAGCATGGTCGTCGTCCTCTGGTCAGCTCATCGTCGTCAACCCCAAACATAAAGCAGGAATATCCCAAGGAGGACACACCACTGAGTGAAATAACAGACAGCTTGGAGCCTAATTTTTGGTCAGATTTGAAGGTTGACTTTGTGCTTTCGGAGCCCTTGAAGATGTCGACTGAATATAATGCCGATGCCGTGTATTCATATGGTGCGGCTACTATGGATTTTGGAGTGGATCATCATCTCCGCTTTGATTGA 942 0.4883 MGTLCPDHVSADKESIIRELVEGKECASQLKLLFQKPSGPGETPSADQLISKILRSFTQSISVLTSSEAGGEVGQISAISGLSGSPLGTSSCNGRRPDESGQSRKRSQPPPTKDRRGCYKRRKTGDTRTKISHTFEDDHAWRKYGQKEILNSKFPRSYFRCTRKHDQGCKAIKQVQRIQENPEMFLTTYIGFHTCKDNLKAPEMVVTDSGNWESYLEPPESKKTPNKDQKEHGRRPLVSSSSSTPNIKQEYPKEDTPLSEITDSLEPNFWSDLKVDFVLSEPLKMSTEYNADAVYSYGAATMDFGVDHHLRFD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0112 313 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 228 IPR044810 GO:0003700
Lele03g0112 313 MobiDBLite consensus disorder prediction 212 260 - -
Lele03g0112 313 MobiDBLite consensus disorder prediction 78 97 - -
Lele03g0112 313 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0112 313 MobiDBLite consensus disorder prediction 98 127 - -
Lele03g0112 313 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0112 313 MobiDBLite consensus disorder prediction 220 235 - -
Lele03g0112 313 Pfam WRKY DNA -binding domain 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0112 313 ProSiteProfiles WRKY domain profile. 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0112 313 Gene3D WRKY domain 120 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0112 313 MobiDBLite consensus disorder prediction 78 127 - -
Lele03g0112 313 MobiDBLite consensus disorder prediction 236 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0112 Lele-ChrLele03 628797 630573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0112 11 208 WRKY Transcription Factor Family AT3G56400 45.960 2.38e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele03g0112 WRKY 2.4e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0449 26 2828616 2834154 Lele03g0112 03 628797 630573 CCT
Lele27g1646 27 21976384 21981438 Lele03g0112 03 628797 630573 CCT
Lele28g0444 28 2811732 2817195 Lele03g0112 03 628797 630573 CCT
Lele01g0111 01 663967 665736 Lele03g0112 03 628797 630573 hybridization