Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0111 ATGGAAGAGGCCACTGGTTCTTTAATACAGCGTGCTTGTGAATTAGCCAGACACCTGGAATCAAATTTTCCCAACTTGGCTAACCAACCCGATACACTGTTCACGTCCATTGATGAGATAGTGAAGACTTTCTTGGCCGCAAAAGAAAGCCTGAGACTGTTTCCCCAGCACCCAACGCCACCTTCTTCTTACTTTGCTCATCAGCCGATCAGATCCACCAGTCATGCACAGCCAATGGATCAGTCGATTCGTGATCGAATGGAACGATCACGATCAGCTCAAATGAGACTGGGAAAGAGTAATAGCAGGAAAAGTGATTCTGAGACGAAGACAATGGTGGCACCGGCGCCTAGGTTTGGGAACAAAGAGATTCCACCAGAAGATGGTTTCACTTGGCGAAAATATGGCCAGAAAGAGATATTTGGCTCTAACTACCCAAGGAGTTATTACAGATGCACCCACCAGAAATTATATAAATGTCCGGCGAAGAAGCAAGTACAGAGACTTGATAACAACCCTAACACATTTGCAGTAACATACCGAGGCAGTCACAGCTGCATTTTTTCCTCCACAGCTCCATCCTCAGTTCCACCTCCACACCTTTTCGCTGACTTCAACACCACCGTTTCCCCTCAGCTGTCTTCTTCTTCAGCTTCAGTTTCCAGGTGGCTCCCCTCGCCCCACCTCGGCCTCTGCACCGGTTCCGCCGCCGCCCCGAATGGTGTGGATGCCGGTACTGCCAGTGGAGGCCCCTCCACTTCGAGATACGGTGGTAGTACTGAATTTATGGGGGCAGATATAGCTGATGCTATGTTTAATTCTACTGGGAGTAGAGCCATTGAATCCTTCCTGTTTCCTGAAGACAAATGGGAGTTCGGTGACAAGAAAAGTTAA 894 0.4855 MEEATGSLIQRACELARHLESNFPNLANQPDTLFTSIDEIVKTFLAAKESLRLFPQHPTPPSSYFAHQPIRSTSHAQPMDQSIRDRMERSRSAQMRLGKSNSRKSDSETKTMVAPAPRFGNKEIPPEDGFTWRKYGQKEIFGSNYPRSYYRCTHQKLYKCPAKKQVQRLDNNPNTFAVTYRGSHSCIFSSTAPSSVPPPHLFADFNTTVSPQLSSSSASVSRWLPSPHLGLCTGSAAAPNGVDAGTASGGPSTSRYGGSTEFMGADIADAMFNSTGSRAIESFLFPEDKWEFGDKKS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0111 297 ProSiteProfiles WRKY domain profile. 127 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0111 297 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0111 297 MobiDBLite consensus disorder prediction 73 122 - -
Lele03g0111 297 Gene3D WRKY domain 117 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0111 297 SUPERFAMILY WRKY DNA-binding domain 124 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele03g0111 297 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele03g0111 297 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 200 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0111 Lele-ChrLele03 624550 626460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0111 1 288 WRKY Transcription Factor Family AT2G40740 34.251 1.48e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele03g0111 WRKY 6.4e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0110 01 659704 661595 Lele03g0111 03 624550 626460 hybridization
Lele02g0109 02 625787 627667 Lele03g0111 03 624550 626460 hybridization