Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0102 ATGCTTGTGATATTGGGTTGGGCCCATATAAAATCCAGAAATGCGCCAAACTTAAACCCTAGGGTCATCACTCTCCTTCTCCTCTTCTGCACACCACGCCAATCGTCGGAGGCGCGCGGCTTCGAGCTTCAGATCCCATCAGCCATGACTTTTAAGAGAAGGAACGGTGGTCGCAACAAGCATGGCCGTGGACACGTTAAATTCATTCGCTGCTCCAACTGTGGCAAATGTTGCCCCAAGGACAAGTCAATTAAAAGGTTTCTTGTAAGGAACATTGTTGAGCAAGCTGCAGTTAGGGATGTTCAGGAAGCCTGTGTATACGAGCAATACACCCTTCCCAAGCTGTATGTTAAGATGCAATATTGCGTCTCCTGCGCAATTCACTCCCATGTTGTGAGGGTTCGATCTCGCACAGATAGGAGGAACCGTGAACCCCCACAACGCTTCATCAGGCGCAGGGATGATCAACCAAGGCCTGGTCAGCCAGGGCAAGCACCTCGTCCTGCTGGAGCCGGAGCTCCTGCCCGTGCCTAA 534 0.5169 MLVILGWAHIKSRNAPNLNPRVITLLLLFCTPRQSSEARGFELQIPSAMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDQPRPGQPGQAPRPAGAGAPARA 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0102 177 PANTHER 40S RIBOSOMAL PROTEIN S26 49 171 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele03g0102 177 Gene3D Ribosomal protein S26e 49 162 IPR038551 -
Lele03g0102 177 MobiDBLite consensus disorder prediction 135 177 - -
Lele03g0102 177 Pfam Ribosomal protein S26e 49 154 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele03g0102 177 ProSitePatterns Ribosomal protein S26e signature. 121 128 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele03g0102 177 MobiDBLite consensus disorder prediction 137 158 - -
Lele03g0102 177 FunFam 40S ribosomal protein S26 49 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0102 Lele-ChrLele03 585817 587536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0102 49 164 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 6.37e-69 204