Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0100 ATGGAACTGCTTTGTCTATTTCATTTCATTTCATCTTATAATTTGACATCCGCTGCGAGCAACGCACATGGGGAAGGAGCAAAAATGAGCACTGTTAGTTGTTTTGGCTTTCCTTCCCTATTCAGAGCGTCTCGCGACATTGATGGTGTTTCAAAGCAGCCGAAGAAGAAAAGCTCATGGAGTTTTATGACCCAGAATACCCCAATCAGGTTGAATCATCAAATCTTTTGCAAACGATCAGACAGTGGGATTGAGGAGAACCCCACAAGCAGGAGCGTCTCTAATTCCAAGAACAGGATGGAGGAATACAATATAGCTATGAAGAAAATGATGAGGAACCCTTATGAGTATCACCACGACCTCGGTATGAATTACACACTTATAACTGATAGCTTGATCGTGGGCTCCCAGCCACAAAAACCTGAAGATATAGATCACCTCAAAAAGGAAGAGGATGTAGCATACATTCTAAACTTGCAGCATGACAAGGATGTGGAGTATTGGGGAATAGACTTACAATCTATAATAAGAAGATGCCGTGAACTCCGTATTCGTCACATGAGGAGGCCTGCAGTAGACTTCGACCCAAAGTCTTTGAGAAATGCGCTGCCAAAAGCAGTTTCGTCACTGGAATGGGCTATTTCTGAGGGAAAAGGAAGAGTGTATGTGCATTGCACGGCTGGACTTGGAAGAGCTCCGGCAGTGGCAATTGCTTACTTGTTCTGGTTCTGTGACATGAACCTAAATGCAGCATATGATATGTTGACAGCAAAGAGACCTTGTGGACCCAATAAAAGAGCAATACGCGGGGCTACCTATGATTTGGCGAAGAATGATCCGTGGAAAGAGCCATTTGAGAGTCTTCCAGAACATGCATTTGAGGATGTAGCTGGCTGGGAGAGGGATTTGATTCAAAATCGAGTCCGTTCTCTTCGTGGAACTTGA 945 0.4413 MELLCLFHFISSYNLTSAASNAHGEGAKMSTVSCFGFPSLFRASRDIDGVSKQPKKKSSWSFMTQNTPIRLNHQIFCKRSDSGIEENPTSRSVSNSKNRMEEYNIAMKKMMRNPYEYHHDLGMNYTLITDSLIVGSQPQKPEDIDHLKKEEDVAYILNLQHDKDVEYWGIDLQSIIRRCRELRIRHMRRPAVDFDPKSLRNALPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNAAYDMLTAKRPCGPNKRAIRGATYDLAKNDPWKEPFESLPEHAFEDVAGWERDLIQNRVRSLRGT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0100 314 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 107 314 - -
Lele03g0100 314 Gene3D Protein tyrosine phosphatase superfamily 107 314 IPR029021 -
Lele03g0100 314 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 69 296 - -
Lele03g0100 314 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 121 266 IPR029021 -
Lele03g0100 314 SMART dsp_5 124 274 IPR020422 GO:0006470|GO:0008138
Lele03g0100 314 Pfam Dual specificity phosphatase, catalytic domain 145 264 IPR000340 GO:0008138|GO:0016311
Lele03g0100 314 ProSiteProfiles Dual specificity protein phosphatase domain profile. 124 281 IPR020422 GO:0006470|GO:0008138
Lele03g0100 314 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 201 260 IPR000387 GO:0016311|GO:0016791
Lele03g0100 314 CDD DSP_laforin-like 123 270 IPR045204 GO:0019203|GO:0046838
Lele03g0100 314 Coils Coil 93 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0100 Lele-ChrLele03 573564 576323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0100 86 314 Protein tyrosine phosphatase (PTP) family AT3G10940 80.870 4.23e-145 408