Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0068 ATGGCCGACCTTTCTTCCTCACCCCCTCATGCGCTTCTCCCTCCCCAAGAAACCAAACCCACCACCGTTGCCACCGCCACTCCCTGCCCAACATCTTCTAATAACACCAAAACTGACTCTGCTCGCAAATGTAAAGGCAAGGGTGGTCCCGATAACAACAAATTTAGGTACCGTGGCGTGAGGCAACGAAGCTGGGGCAAATGGGTCGCTGAGATCCGAGAGCCTCGCAAGCGAACCCGAAAGTGGCTCGGCACCTTCGCCACCGCCGAGGACGCCGCTAGAGCCTACGACCGCGCCGCTATCATCCTCTACGGCTCTAGGGCTCAGCTCAATTTACAACCCTCCGCTGCCTCTTCCCACTCTTCCTCCTCTCGGACCTCTACTCCTTCCTCTTCTCAAACCCTTCGTCCCTTGCTTCCCCGCCCTTCTGGCCTTATCTTCGGCTTTTCTTCTGCCGCCACATCAGGTTTCTTGCCCTACGGGGTTTATCCCAATAATACTAATACTGAGTATATCCCGCAAATGATGTACCCGTTGAATAATAATATGGTGCAACTTCCACAGAAACCGTATCAGTCCCCAGAATCTGATGGAAATATTGTCGACAACTCCAACACAGCAACCTCGTACCAGGATCAGCTGCTGCAGCAGCAGCCTCAGTTGAATCTACGCCAGCATCAGAATTGCATGCACGATGATATTAGTTCTCTGGTAAGTTCGGTTGGGTCAAGTTTGTGTTCCTCGCAGACACAGACTGTGGTTACACCTGCGGATCCGTGGCCGTTGACGAATGAGGAAGAATACCCACCAAGTCTATGGGACTACTATAACGATCCTTTCCTCTTTGATTTGTAA 855 0.5205 MADLSSSPPHALLPPQETKPTTVATATPCPTSSNNTKTDSARKCKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAIILYGSRAQLNLQPSAASSHSSSSRTSTPSSSQTLRPLLPRPSGLIFGFSSAATSGFLPYGVYPNNTNTEYIPQMMYPLNNNMVQLPQKPYQSPESDGNIVDNSNTATSYQDQLLQQQPQLNLRQHQNCMHDDISSLVSSVGSSLCSSQTQTVVTPADPWPLTNEEEYPPSLWDYYNDPFLFDL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0068 284 CDD AP2 56 113 IPR001471 GO:0003700|GO:0006355
Lele03g0068 284 FunFam Ethylene-responsive transcription factor 2 56 114 - -
Lele03g0068 284 PRINTS Ethylene responsive element binding protein signature 79 95 IPR001471 GO:0003700|GO:0006355
Lele03g0068 284 PRINTS Ethylene responsive element binding protein signature 57 68 IPR001471 GO:0003700|GO:0006355
Lele03g0068 284 MobiDBLite consensus disorder prediction 1 57 - -
Lele03g0068 284 SUPERFAMILY DNA-binding domain 56 114 IPR016177 GO:0003677
Lele03g0068 284 Pfam AP2 domain 56 104 IPR001471 GO:0003700|GO:0006355
Lele03g0068 284 MobiDBLite consensus disorder prediction 18 39 - -
Lele03g0068 284 ProSiteProfiles AP2/ERF domain profile. 56 113 IPR001471 GO:0003700|GO:0006355
Lele03g0068 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 30 239 - -
Lele03g0068 284 SMART rav1_2 56 119 IPR001471 GO:0003700|GO:0006355
Lele03g0068 284 MobiDBLite consensus disorder prediction 114 138 - -
Lele03g0068 284 MobiDBLite consensus disorder prediction 40 57 - -
Lele03g0068 284 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0068 Lele-ChrLele03 426733 427587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0068 42 284 AP2-EREBP Transcription Factor Family AT2G40220 45.051 5.05e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele03g0068 AP2 9.4e-13 CL0081