Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0067 ATGACGAGCCAAGATTCCCCGGGTTTTACGTGGCACTACACAGAGCTGGATGACCGAAATCTCGAAATCCGTGGCCGAACATTTTTCTTCGTGGTCGTCCTGTTCTCCATTATCCTTATTGTGGCCCTTCTCTTCCTTTATGCTCGCTGGATCTGGAGGTACCGGGGCCAACATCCCGCCACCCACCATTCCAACGGAGCGCCCCTCGCGCCGCCGCCTCTTCCGCCACAGGGCCTCGACCCCGCTTCAATCGAGAAATTGCCCATAGTTTTGCACCAAAGGACTTTGGATGCCAACAGTAAATTGGAGGAAACAGAGTGCTGTATATGCCTTGGCACGTTCAAAGATGGTGAGAAATTGAAGGTTTTGCCCGGCTGTGACCATAGCTTCCACTGCGAATGTGTTGATAAGTGGCTTGCCAATCACTCTAGTTGTCCTCTCTGCAGATCTTCTCTCAAGGTTCACTCTTCCTTTCCCAAGATTCTGATTCAAGAACCACCCGATCGAATCAATCTTCCCCTGTAG 525 0.5143 MTSQDSPGFTWHYTELDDRNLEIRGRTFFFVVVLFSIILIVALLFLYARWIWRYRGQHPATHHSNGAPLAPPPLPPQGLDPASIEKLPIVLHQRTLDANSKLEETECCICLGTFKDGEKLKVLPGCDHSFHCECVDKWLANHSSCPLCRSSLKVHSSFPKILIQEPPDRINLPL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0067 174 SUPERFAMILY RING/U-box 99 156 - -
Lele03g0067 174 SMART ring_2 107 148 IPR001841 -
Lele03g0067 174 FunFam RING-H2 finger protein ATL66 71 154 - -
Lele03g0067 174 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Lele03g0067 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 155 IPR013083 -
Lele03g0067 174 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 155 - -
Lele03g0067 174 Pfam Ring finger domain 106 149 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0067 Lele-ChrLele03 422849 423373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0067 4 157 C3H Transcription Factor Family AT3G11110 46.104 3.43e-37 124