LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele03g0057	ATGGCTGTCTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTCACAGAGGCTGAGTCCGCCCTCAAAGCGGACGTCATCGAGAAGGGTGATACGGGGTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGCGCCTCCGCCTCCGCCGGTCAGAGTCCGATCGTTTTCCCGATGCTCGGAAAGGCACTGTGGCGGAGATTGCTGTAAGTCGTCGGACGATGAGTTTGTGAGCTTGGGCTCATCTACTTCTGGCGTTTGTTCTTCTGAATTCATCAATCCATATGGAATTCGCTACTCATCCCAAACTCAGAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAATTTGGCACAGCACGTGACTACCACGACTTTGACATGCAAAATGAACTGTATTGGTATGATGAGAAAGATGATGACGATTTCATGACCCCCAGTTTTGAGGGGCCAGAGTTCTTTGGCTGTCAAAGTGAGGATAAGTTCATCATGACATCAGAAATGGAGAATCAACACGAAAATCTTCCAGAAAATAATTACAAAACTGAAGTATTCCAAGTGGAGGGAAATGGGGATTGCATGGACAAACTATGCCTTCATAATCATTCAGATGTAGGGAATGAAAATGTGACTTGTTTAAAAGACTTTTGTCACATTGATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTGGAGAGGTTGAGAATCCTACTTTTGTCTATAATTGTGAAGTTCCATTGAGCAAACGCTCTGCAGGTTCAGGAGAGTCTTGTAGTGGAGATCCTAGTAACGAACACTACCCAAGTTTAAAAGAAATTCATCTGAATGATTTGCATTTAAAGGGTGTTGGGGATAGTTCCTCCACTGATTCTGCTCCAGAGCATTCTATGAGCCAAACTTTTGACCTCTATCCTAACAGTAACGGCAATAAGGGTTTCAAAGATCCCTATGACTTAACTATCGAAGCTGCTGAAAAGGACCTGCCAAATGGACTCGCCAGCTATAAAGCTCAAGATTGTAGGGAATTCACTGAAGAATGCAAAGATCCAGAAAATGCAGCAGATGGAGAAGATGCTATTGATGATGAGCTTTTAAAGTACACTCACGAGGATGAATACGAAGTATTTGACTTGAGAATTATACATAGAAAGAACAGGACTGGGTTTGAAGAAAGCAAAGATCTGCCCATTGTGCTAAATGCAGTCGTAGGCGGCAGGTACTATGTTACAGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCAGATAGGAATAGATGTCTGCTTGAAGATTATAAAAAACGACAAAGACTTCTTTGACCAAAGCTTAGATGAAATTAAGCTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATGAACGCCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAAGCGTATTTTACATTGAACAGGTTGCAGCTCATTGCTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACAGTGACCTGAAGCCGGAAAATATTCTTATTAAAAGTTATAAAAGATGTGAGATTAAAGTTATTGATCTAGGAAGCAGTTGCTTTCAATCAGACAATCTATGCCTATACGTACAGTCGCGATCCTATCGGGCACCTGAAGTGATGCTAGGCCTCCAATATGATGAGAAGATTGACATGTGGTCTCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTGCAATTATTCTTGCGCGCATGGTTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTTAAGGGGCAAGAAACACACAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGGAGACAGACCAATTGGAGTACATAATTCCAGAGGAGTGGTCGTTGGAGCAGCACCTGCAGGTTTCTGATGCGATGTTTATTGACTTTGTCAGATTCTTGCTTAGCACCAATCCCAGAAGGCGACCAACTGCAAGACAGGCACTGAAGCATCCATGGCTTTCCCATGTTTATGACTCCCAGTAG	2157	0.4233	MAVSDVGAVLEFLRNNGFTEAESALKADVIEKGDTGSFDYEKFFFPMAPPPPPVRVRSFSRCSERHCGGDCCKSSDDEFVSLGSSTSGVCSSEFINPYGIRYSSQTQKDSESSSDRLSQFGTARDYHDFDMQNELYWYDEKDDDDFMTPSFEGPEFFGCQSEDKFIMTSEMENQHENLPENNYKTEVFQVEGNGDCMDKLCLHNHSDVGNENVTCLKDFCHIDKKEQLEGGLVGEVENPTFVYNCEVPLSKRSAGSGESCSGDPSNEHYPSLKEIHLNDLHLKGVGDSSSTDSAPEHSMSQTFDLYPNSNGNKGFKDPYDLTIEAAEKDLPNGLASYKAQDCREFTEECKDPENAADGEDAIDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNAVVGGRYYVTEYLGSAAFSKVVQAHDLQIGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADERHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLIARQCLEALQYLHSLGIIHSDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDMWSLGCILAELCSGEVLFPNEAVAIILARMVGMLGPIDLEMLVKGQETHKYFTKEYDIYHVNEETDQLEYIIPEEWSLEQHLQVSDAMFIDFVRFLLSTNPRRRPTARQALKHPWLSHVYDSQ	718

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele03g0057	718	Gene3D	Phosphorylase Kinase; domain 1	404	490	-	-
	Lele03g0057	718	ProSiteProfiles	Protein kinase domain profile.	409	711	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0057	718	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	535	547	IPR008271	GO:0004672\|GO:0006468
	Lele03g0057	718	SUPERFAMILY	Protein kinase-like (PK-like)	399	715	IPR011009	-
	Lele03g0057	718	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	106	712	-	-
	Lele03g0057	718	CDD	PKc_DYRK_like	409	711	-	-
	Lele03g0057	718	FunFam	Serine/threonine-protein kinase ppk15	488	712	-	-
	Lele03g0057	718	FunFam	Putative serine/threonine-protein kinase dyrk2	403	490	-	-
	Lele03g0057	718	Gene3D	Transferase(Phosphotransferase) domain 1	463	711	-	-
	Lele03g0057	718	MobiDBLite	consensus disorder prediction	284	309	-	-
	Lele03g0057	718	SMART	serkin_6	409	711	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0057	718	Pfam	Protein kinase domain	411	711	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele03g0057	718	MobiDBLite	consensus disorder prediction	283	311	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele03g0057	Lele-ChrLele03	339897	343755	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele03g0057	406	706	MAP Kinase Gene Family	AT5G19010	30.530	1.56e-32	131

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Lele03g0057		Pkinase	5.8e-51	CL0016